OSA | Optics and the Brain 2018

BF1C - Gizmos and Gadgets

Portable and Modular Light Sheet Microscopy Platform

Jan Huisken

BF1C.2 Optics and the Brain (BRAIN) 2018 View: PDF

BF2C - Cerebral Blood Flow in Humans

Quantification of Cerebral Blood Flow in Adults by Dynamic Contrast-Enhanced NIRS: Validation against MRI

Daniel Milej, Lian He, Androu Abdalmalak, Wesley Baker, Udunna C. Anazodo, Sudipto Dolui, Venkaiah C. Kavuri, Mamadou Diop, William Pavlosky, Ramani Balu, John A. Detre, Andrew Kofke, Arjun G. Yodh, and Keith St. Lawrence

BF2C.2 Optics and the Brain (BRAIN) 2018 View: PDF

A Novel Fiberless Diffuse Speckle Contrast Flowmeter for Tissue Blood Flow Measurement

Mingjun Zhao, Chong Huang, Siavash Mazdeyasna, Elie Abu Jawdeh, Henrietta Bada, and Guoqiang Yu

BF2C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative tissue spectroscopy techniques for measuring cerebral perfusion and metabolism

Mamadou Diop

BF2C.4 Optics and the Brain (BRAIN) 2018 View: PDF

BF3C - Looking Deeper

In vivo Brain Imaging with Non-Degenerate 2-Photon Microscopy

Sanaz Sadegh, Mu-Han Yang, Christopher G. L. Ferri, Martin Thunemann, Payam A. Saisan, Erik Rodriquez, Stephen R. Adams, Sergei A. Vinogradov, Yeshaiahu Fainman, and Anna Devor

BF3C.2 Optics and the Brain (BRAIN) 2018 View: PDF

Combining Near-infrared Excitation with Swept Confocally-aligned Planar Excitation (SCAPE) Microscopy for Fast, Volumetric Imaging in Mouse Brain

Hang Yu, P. Thilanka Galwaduge, Venkatakaushik Voleti, Kripa B. Patel, Mohammed A. Shaik, Wenze Li, and Elizabeth M.C. Hillman

BF3C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Fluorescence endoscope for deep brain imaging with minimal tissue damage using a singlemode fiber

Francois Cote, Joel Crepeau, Nicolas Lapointe, Damon DePaoli, Cleophace Akitegetse, Martin Levesque, and Daniel C. Cote

BF3C.4 Optics and the Brain (BRAIN) 2018 View: PDF

Ultra-Thin Flexible Two-Photon Lensless Endoscopy Using Multicore Optical Fibers

Viktor Tsvirkun, Siddharth Sivankutty, Olivier Vanvincq, Géraud Bouwmans, Rosa Cossart, Esben Ravn Andresen, and Hervé Rigneault

BF3C.5 Optics and the Brain (BRAIN) 2018 View: PDF

BF4C - Microscopy, Structure and Anatomy

3D human brain digital istopatology

Irene Costantini, Giacomo Mazzamuto, Ludovico Silvestri, M. Neri, M. Roffilli, Valerio Conti, Renzo Guerrini, Leonardo Sacconi, and Francesco S. Pavone

BF4C.1 Optics and the Brain (BRAIN) 2018 View: PDF

An automated pipeline for the collection, transfer, and processing of large-scale tomography data

Ming Du, Rafael Vescovi, Ryan Chard, Narayanan Kasthuri, Chris Jacobsen, Eva Dyer, and Doğa Gürsoy

BF4C.2 Optics and the Brain (BRAIN) 2018 View: PDF

Investigating Pathological Features of Alzheimer’s Disease in Human and Mouse Brain Tissue with Visible Light Optical Coherence Microscopy

Antonia Lichtenegger, Martina Muck, Pablo Eugui, Danielle J. Harper, Marco Augustin, Christoph K. Hitzenberger, Adelheid Woehrer, and Bernhard Baumann

BF4C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Extended Depth of Field in Confocal Microscopy

Amaury Badon and Jerome Mertz

BF4C.5 Optics and the Brain (BRAIN) 2018 View: PDF

Improve Axial Resolution in Line-Scanning Temporal Focusing Microscopy with Global Optimum Adaptive Optics

Yuanlong Zhang, Hao Xie, Lingjie Kong, and Qionghai Dai

BF4C.6 Optics and the Brain (BRAIN) 2018 View: PDF

BTh2C - Brain Disorders: Mouse to Man

Functional recovery after stroke is negatively influenced by contralesional homotopic activity

Adam Q. Bauer, Andrew W. Kraft, Grant A. Baxter, Annie R. Bice, Michael R. Bruchas, Jin-Moo Lee, and Joseph P. Culver

BTh2C.1 Optics and the Brain (BRAIN) 2018 View: PDF

All-Optical Rehabilitation Promotes Motor Recovery in a Mouse Model of Stroke

Emilia Conti, Anna Letizia Allegra Mascaro, Francesco Resta, Leonardo Sacconi, Maria Pasquini, Silvestro Micera, and Francesco S. Pavone

BTh2C.2 Optics and the Brain (BRAIN) 2018 View: PDF

Multi-spectral photoacoustic tracking of non-invasive photothrombotic ischemic stroke

Dene Ringuette, Joshua Lockwood, Adam C. Waspe, Peter L. Carlen, Philippe P. Monnier, and Ofer Levi

BTh2C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Optical Imaging in a Mouse Model of Glioma Identifies Different Causes for Proximal and Distal Disruptions to Functional Connectivity

Inema Orukari, Joshua S Siegel, Adam Q. Bauer, Grant A Baxter, Joshua S. Shimony, Joshua B. Rubin, and Joseph P. Culver

BTh2C.4 Optics and the Brain (BRAIN) 2018 View: PDF

Near Infra-Red Spectroscopy (NIRS) in Urea Cycle Disorders and Typically Developing Children

Fatima Chowdhry, Andrea Gropman, Afrouz Anderson, Hadis Dashestani, and Amir Gandjbakhche

BTh2C.5 Optics and the Brain (BRAIN) 2018 View: PDF

Near Infrared Spectroscopy (NIRS) reveals the effect epinephrine on cerebral oxygen delivery and metabolism during cardiac arrest

Reyhaneh Nosrati, Steve Lin, Paul Dorian, and Vladislav Toronov

BTh2C.6 Optics and the Brain (BRAIN) 2018 View: PDF

Monitoring Cerebral Blood Flow And Oxygenation During Cardiac Surgery

Parisa Farzam, Stefan Carp, Juliette Selb, Parya Farzam, Melissa Wu, Maria A. Franceschini, and Jason Z. Qu

BTh2C.7 Optics and the Brain (BRAIN) 2018 View: PDF

Fluorescence Guidance for Brain Tumor Biopsies

Neda Haj-Hosseini, Johan Richter, Lisa Kobayashi Frisk, Peter Milos, Martin Hallbeck, and Karin Wårdell

BTh2C.8 Optics and the Brain (BRAIN) 2018 View: PDF

BTh4C - Using the Tools

Multiphoton Ultrafast LOcal Volume Excitation (ULOVE) through acousto-optic wavefront shaping to record and control neuronal activity.

Benjamin Mathieu, Vincent Villette, Walther Akemann, Stephan W. Evans, Mariya Chavarha, Jonathan Bradley, Dongqing Shi, Laurent Bourdieu, Michael Lin, and Stéphane Dieudonné

BTh4C.2 Optics and the Brain (BRAIN) 2018 View: PDF

High-resolution Hippocampal Imaging in Mice Navigating in a Flat Real-world Environment

Mary Ann Go and Simon Schultz

BTh4C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Minimally invasive microscopy using GRIN lens microendoscopes

Pavan Chandra Konda, Julia Edgar, Susan Barnett, and Andrew R. Harvey

BTh4C.4 Optics and the Brain (BRAIN) 2018 View: PDF

Fast Confocal Fluorescence Imaging in Freely-Behaving Mice

Clara Dussaux, Jozsua Fodor, Vivien Szabo, Yan Chastagnier, Jean-François Léger, Laurent Bourdieu, Julie Perroy, and Cathie Ventalon

BTh4C.5 Optics and the Brain (BRAIN) 2018 View: PDF

BTu2C - Multiscale Connections and Networks

Fast 3D imaging and re-activation of neuronal networks, dendrites, and spines in several cubic millimeter volumes during visual learning to understand visual representation

Gergely Szalay, Zoltán Szadai, Linda Judák, Pál Maák, Katalin Ócsai, Máté Veress, Tamás Tompa, Balázs Chiovini, Gergely Katona, and Balázs Rózsa

BTu2C.1 Optics and the Brain (BRAIN) 2018 View: PDF

Two-Photon Imaging and Manipulation of Neural Networks with High Spatial Resolution and Minimal Crosstalk

Angelo Forli, Dania Vecchia, Noemi Binini, Serena Bovetti, Claudio Moretti, Mathias Mahn, Christopher A. Baker, McLean M. Bolton, Ofer Yizhar, and Tommaso Fellin

BTu2C.2 Optics and the Brain (BRAIN) 2018 View: PDF

Spatially and Temporally Precise Optical Probing of Neural Activity Readout

Gilad M. Lerman, Jonathan V. Gill, Dmitry Rinberg, and Shy Shoham

BTu2C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Using Connectivity to Infer Behavior from Cortical Activity Recorded through Widefield Transcranial Imaging

Shiva Salsabilian, Christian R. Lee, David J. Margolis, and Laleh Najafizadeh

BTu2C.4 Optics and the Brain (BRAIN) 2018 View: PDF

Mesoscale Imaging of Cortical Dynamics during Motor Skill Learning

Eros Quarta, Anna Letizia Allegra Mascaro, Jessica Lucchesi, Costanza Campaioli, Leonardo Sacconi, and Francesco Saverio Pavone

BTu2C.5 Optics and the Brain (BRAIN) 2018 View: PDF

Optical Imaging of Functional Connectivity Across Development in the Mouse Cortex

Rachel M. Rahn, Annie R. Bice, Lindsey M. Brier, Joseph D. Dougherty, and Joseph P. Culver

BTu2C.6 Optics and the Brain (BRAIN) 2018 View: PDF

BTu4C - New Technologies for Human Brain Function

Decoding Visual Information from High Density Diffuse Optical Tomography Neuroimaging Data

Kalyan Tripathy, Andrew K. Fishell, Zachary E. Markow, Tracy Burns-Yocum, Dillan J. Newbold, Pooja Tripathy, Bradley L. Schlaggar, and Joseph P. Culver

BTu4C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Diffuse optical tomography for noninvasive functional brain imaging in awake behaving humans

Xianjin Dai, Hao Yang, and Huabei Jiang

BTu4C.4 Optics and the Brain (BRAIN) 2018 View: PDF

Coherent Hemodynamics Spectroscopy (CHS): A New Way to Look at Cerebral Hemodynamic Oscillations

Sergio Fantini, Kristen Tgavalekos, Joshua Kornbluth, Thao Pham, Nishanth Krishnamurthy, Kosar Khaksari, Giles Blaney, and Angelo Sassaroli

BTu4C.5 Optics and the Brain (BRAIN) 2018 View: PDF

BW2C - Rethink the Scan

Partially coherent holographic temporal focusing for 3D light sculpting with single neuron resolution

Nicolas Pégard, Alan Mardinly, Ian Oldenburg, Laura Waller, and Hillel Adesnik

BW2C.2 Optics and the Brain (BRAIN) 2018 View: PDF

Wide Area Profiling of Neuronal Function Using Hadamard Microscopy

Vicente J. Parot, Samouil L. Farhi, Abhinav Grama, Masahito Yamagata, Ahmed Abdelfattah, Yoav Adam, Shan Lou, Jeong Jun Kim, Robert E. Campbell, David D. Cox, and Adam E. Cohen

BW2C.3 Optics and the Brain (BRAIN) 2018 View: PDF

Volumetric Imaging of Neural Activity employing an Overdrive Spatial Light Modulator

Rui Liu, Neil Ball, Jim Brockill, Jun Zhuang, Casey Whites, Lenard Kuan, Ryan Valenza, Arielle Steger, Shig Nishiwaki, David Sullivan, Cliff Slaughterbeck, Colin Farrell, Jerome Lecoq, and Peter Saggau

BW2C.4 Optics and the Brain (BRAIN) 2018 View: PDF

High Accuracy Two-Photon Population Imaging of GCaMP6 Signals with Fast Smart Line Scan

Marco Brondi, Manuel Molano-Mazón, Stefano Panzeri, and Tommaso Fellin

BW2C.5 Optics and the Brain (BRAIN) 2018 View: PDF

Video-rate volumetric neuronal imaging using 3D targeted illumination

Sheng Xiao, Hua-an Tseng, Howard Gritton, Xue Han, and Jerome Mertz

BW2C.6 Optics and the Brain (BRAIN) 2018 View: PDF

In vivo long-term cortical photoacoustic microscopy using ultrasound-sensitive chronic cranial window

Hao Li, Xiao Shu, Xian Zhang, Biqin Dong, Hao F. Zhang, and Cheng Sun

BW2C.7 Optics and the Brain (BRAIN) 2018 View: PDF

JTh1A - Biomed Plenary III

Unraveling the origins of endogenous optical metabolic changes using a multi-parametric approach

Irene Georgakoudi, Zhiyi Liu, Dimitra Pouli, Carlo Alonzo, Antonio Varone, Sevasti Karaliota, Kyle P. Quinn, Karl Münger, and Katia P. Karalis

JTh1A.1 Optics and the Brain (BRAIN) 2018 View: PDF

JTh3A - Poster Thursday

An Indexing Method Based on Diffuse Optical Spectroscopy for Surface Identification of Livers with Parenchymal Fibrosis Stages Unacceptable for Transplantation

Daqing Piao, Halen Borron, Alan Hawxby, Harlan Wright, and Erin Rubin

JTh3A.1 Optics and the Brain (BRAIN) 2018 View: PDF

Novel Multifunctional Porphyrazine Pigments for Bimodal Tumor Diagnostics, Photodynamic Therapy and Real Time Monitoring of Its Progress by Intracellular Viscosity Sensing

L.G. Klapshina, S.A. Lermontova, I.S. Grigoryev, N.Yu. Shilyagina, M.S. Muravyeva, D.V. Yuzhakova, I.V. Balalaeva, M.V. Shirmanova, and E.V. Zagaynova

JTh3A.10 Optics and the Brain (BRAIN) 2018 View: PDF

Breath hold paradigm assesses regions of reduced oxygenation in diabetic foot ulcers

Kevin Leiva, Jagadeesh Mahadevan, Kacie Kaile, Richard Schutzman, Edwin Robledo, Dinesh Khandavilli, Sivakumar Narayanan, Varalakshmi Muthukrishnan, Mohan Viswanathan, and Anuradha Godavarty

JTh3A.11 Optics and the Brain (BRAIN) 2018 View: PDF

A Rotatable Trans-rectal Probe for Simultaneous Ultrasound and Optical Imaging of Prostate

Hyun Keol Kim, Jong Hwan Lee, Emerson Lim, and Andreas H. Hielscher

JTh3A.12 Optics and the Brain (BRAIN) 2018 View: PDF

A 12-wavelength NIR spectral tomography (NIRST) system for monitoring breast tumor response to neoadjuvant chemotherapy

Yan Zhao, Xu Chao, Erica B. Bernhardt, Peter Kaufman, Brian W. Pogue, Keith D. Paulsen, and Shudong Jiang

JTh3A.13 Optics and the Brain (BRAIN) 2018 View: PDF

A comparative study between acid-etching and Er,Cr:YSGG laser irradiation on enamel surface evaluated by OCT and SEM

Daniela S. Lopes, Cláudia C. B. O. Mota, Daísa L. Pereira, Denise M. Zezell, and Anderson S. L. Gomes

JTh3A.15 Optics and the Brain (BRAIN) 2018 View: PDF

A comprehensive analytical based computational approach for laser induced heat in a heterogeneous turbid medium

Hakan Erkol, Farouk Nouizi, Alex Luk, Mehrnaz Mehrabi, Maha Algarawi, Mehmet Burcin Unlu, and Gultekin Gulsen

JTh3A.16 Optics and the Brain (BRAIN) 2018 View: PDF

A Dual-Mesh Monte Carlo Algorithm Using a Coarse Tetrahedral Mesh and Voxel Output

Shijie Yan, Anh Phong Tran, and Qianqian Fang

JTh3A.17 Optics and the Brain (BRAIN) 2018 View: PDF

Assessing matrix reorganization in a hormone-sensitive 3D breast tissue model

Zhiyi Liu, Lucia Speroni, Kyle P Quinn, Carlo Alonzo, Dimitra Pouli, Emily Stuntz, Carlos Sonnenschein, Ana M Soto, and Irene Georgakoudi

JTh3A.18 Optics and the Brain (BRAIN) 2018 View: PDF

Noninvasive characterization of PEGylated Transferrin Probe Delivery using Lifetime-based FRET

Sez-Jade Chen, Nattawut Sinsuebphon, Alena Rudkouskaya, Margarida Barroso, and Xavier Intes

JTh3A.19 Optics and the Brain (BRAIN) 2018 View: PDF

Optical analysis discriminates meningioma from normal surrounding tissue

Hussein Mehidine, Fanny Poulon, Marjorie Juchaux, Pascale Varlet, Bertrand Devaux, Johan Pallud, and Darine Abihaidar

JTh3A.20 Optics and the Brain (BRAIN) 2018 View: PDF

Superresolved Magnetic Imaging of Cells with Nanodiamonds

Martina Barbiero, Stefania Castelletto, Qiming Zhang, Mirren Charnley, Ye Chen, Sarah Russell, and Min Gu

JTh3A.21 Optics and the Brain (BRAIN) 2018 View: PDF

Mid-infrared Photonic Chips for Real-time Breath Biomarkers Analysis

Tiening Jin and Pao Tai Lin

JTh3A.23 Optics and the Brain (BRAIN) 2018 View: PDF

Fluctuation-based super-resolution photoacoustic imaging

Sergey Vilov, Bastien Arnal, Thomas Chaigne, Ori Katz, and Emmanuel Bossy

JTh3A.24 Optics and the Brain (BRAIN) 2018 View: PDF

Spectroscopic Analysis with a Monolithic Micro-structured Microsphere-Fiber Probe

Stephen Holler, Bernadette Haig, and Ryan Riviere

JTh3A.25 Optics and the Brain (BRAIN) 2018 View: PDF

Label-free and Nondestructive Method for Cell Viability Assessment with Two-photon Fluorescence Microscopy

Yang Li, Neal Saini, Xun Chen, and Tong Ye

JTh3A.26 Optics and the Brain (BRAIN) 2018 View: PDF

Stepwise Optical Saturation Microscopy: Obtaining Super-Resolution Images with Conventional Fluorescence Microscopes

Yide Zhang, David Benirschke, and Scott S. Howard

JTh3A.27 Optics and the Brain (BRAIN) 2018 View: PDF

Multispectral total-variation reconstruction applied to lens-free microscopy

L. Hervé, C. Allier, P. Blandin, F. Navarro, M. Menneteau, T. Bordy, O. Cioni, and S. Morales

JTh3A.28 Optics and the Brain (BRAIN) 2018 View: PDF

Interferometric Spectral Modulation of sub-100-fs Pump Pulses for High Chemical Contrast, Background Free, Real Time CARS Imaging

Gábor Molnár, Ádám Krolopp, Norbert Kiss, Gábor Tamás, and Róbert Szipőcs

JTh3A.29 Optics and the Brain (BRAIN) 2018 View: PDF

A Mobile Phone Based Reflectance Pulse Oximeter

Morris Vanegas, Bernhard Zimmermann, Sule Sahin, Stefan Carp, and Qianqian Fang

JTh3A.3 Optics and the Brain (BRAIN) 2018 View: PDF

Localization-based super-resolution photoacoustic imaging

Sergey Vilov, Bastien Arnal, and Emmanuel Bossy

JTh3A.30 Optics and the Brain (BRAIN) 2018 View: PDF

Two-photon laser scanning stereomicroscopy for fast volumetric imaging

Xun Chen, Yanlong Yang, Baoli Yao, Yang Li, and Tong Ye

JTh3A.31 Optics and the Brain (BRAIN) 2018 View: PDF

The Effects of Blood Flow Velocity and Blood Volume on Acousto-Optic Signals

Michal Balberg, Pinhas Girshovitz, Noam Racheli, Revital Shechter, and Sergio Fantini

JTh3A.32 Optics and the Brain (BRAIN) 2018 View: PDF

Novel Diffuse Correlation Spectroscopy for Simulations Estimation of Hemoglobin Concentration, Oxygen saturation, and Blood flow

Parisa Farzam, Davide Tamborini, Bernhard Zimmermann, Kuan C. Wu, David A. Boas, and Maria A Franceschini

JTh3A.33 Optics and the Brain (BRAIN) 2018 View: PDF

Conformable, Wearable and Scalable Imaging Bands for Assessing Joints Diseases

Youngwan Kim, Alessandro Marone, Sarah M. Thompson, Johanan N. Sowah, Henry J. Shulevitz, Hyun K. Kim, Ioannis Kymissis, and Andreas H. Hielscher

JTh3A.34 Optics and the Brain (BRAIN) 2018 View: PDF

Solitary vs Gaussian Waves Gating of InGaAs/InP Avalanche Photodiode to Stabilize Dark Count Rate as Excess Voltage Increases

Ahmad S. Azzahrani, Ahmed C. Kadhim, Susan K. Earles, and Muhammad Riaz

JTh3A.35 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative Measurement of Fluorescein Sodium for Multi-plexed Fluorescence Spectroscopy in Brain

Jaime J. Bravo, Jonathan D. Olson, David W. Roberts, and Keith D. Paulsen

JTh3A.36 Optics and the Brain (BRAIN) 2018 View: PDF

Spectrally constrained approach of spatially resolved spectroscopy: towards a better estimate of tissue oxygenation

Joshua Deepak Veesa and Hamid Dehghani

JTh3A.37 Optics and the Brain (BRAIN) 2018 View: PDF

Fast Monte Carlo Photon Transport Simulations for Heterogeneous Computing Systems

Leiming Yu, Fanny Nina-Paravecino, David Kaeli, and Qianqian Fang

JTh3A.38 Optics and the Brain (BRAIN) 2018 View: PDF

Near Infrared Spectroscopy Setup for Concurrent Spectroscopic, Invasive and MRI Investigations in rats

T. Gladytz, A. Hoppe, K. Cantow, S. Brix, B. Flemming, A. Pohlmann, E. Seeliger, T. Niendorf, and D. Grosenick

JTh3A.39 Optics and the Brain (BRAIN) 2018 View: PDF

Intact primate brain tissue identification using a completely fibered coherent Raman spectroscopy system

Damon DePaoli, Nicolas Lapointe, Younes Messaddeq, Martin Parent, and Daniel C. Côté

JTh3A.4 Optics and the Brain (BRAIN) 2018 View: PDF

Preliminary results of a handheld, low-cost, and multi-wavelength spatial frequency domain imaging system for ex vivo cancer characterization

Mohsen Erfanzadeh, Sreyankar Nandy, Patrick D. Kumavor, and Quing Zhu

JTh3A.40 Optics and the Brain (BRAIN) 2018 View: PDF

Denoising in Monte Carlo Photon Transport Simulations Using GPU-accelerated Adaptive Non-Local Mean Filter

Yaoshen Yuan, Leiming Yu, and Qianqian Fang

JTh3A.41 Optics and the Brain (BRAIN) 2018 View: PDF

Extraction of Group Velocity Dispersion (GVD) Value from Standard Fourier Domain OCT Data

Sylwia M. Kolenderska, Bastian Bräuer, Ehsan Vaghefi, and Frédérique Vanholsbeeck

JTh3A.42 Optics and the Brain (BRAIN) 2018 View: PDF

Use of photoacoustic spectroscopy to evaluate photosensitizer penetration into dentin

Ingrid Gomes Perez Occhi-Alexandre, Mauro Luciano Baesso, Francielle Sato, Lidiane Vizioli de Castro-Hoshino, Pedro Luiz Rosalen, Raquel Sano Suga Terada, Antonio Medina Neto, Antonio Carlos Bento, and Mitsue Fujimaki

JTh3A.43 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative image correction using semi- and fully-automatic segmentation of hybrid optoacoustic and ultrasound images

Elena Merčep, Berkan Lafci, Xosé Luís Deán-Ben, and Daniel Razansky

JTh3A.44 Optics and the Brain (BRAIN) 2018 View: PDF

Computational Performance of Time-Resolved Diffuse Optical Tomography in a Two-Layer Brain Model

David Orive-Miguel, Lionel Hervé, Jérôme Mars, Laurent Condat, Jean-Marc Dinten, and Sophie Morales

JTh3A.45 Optics and the Brain (BRAIN) 2018 View: PDF

The use of optical coherence tomography for the evaluation of the effects of an infrared laser on dentin demineralization

Patricia Aparecida Ana, Elizabete dos Santos Ferreira Silva, Carolina Benetti, Marcelo Magri Amaral, Denise Maria Zezell, and Anderson Stevens Leonidas Gomes

JTh3A.46 Optics and the Brain (BRAIN) 2018 View: PDF

Improving Optical Coherence Tomography Contrast for Assessing Biologic Constructs via TiO2

D.E. Faulkner, C. Roberge, D.M. Kingsley, C.J. Sloat, D.T. Corr, and X. Intes

JTh3A.47 Optics and the Brain (BRAIN) 2018 View: PDF

Detection of vascular plaque from optical coherence tomography images using hidden Markov random field based segmentation

Ammu Prakash, Mark Hewko, Michael Sowa, and Sherif Sherif

JTh3A.48 Optics and the Brain (BRAIN) 2018 View: PDF

Tolerance of Reconstructed Diffuse Optical Tomographic Breast Images to Experimental Errors

Bin Deng, Mats Lundqvist, Qianqian Fang, and Stefan A. Carp

JTh3A.49 Optics and the Brain (BRAIN) 2018 View: PDF

Effect of Optical Coherence Tomography Resolution on the Assessment of Dental Enamel Indications

Christine C Sahyoun, Hrebesh M Subhash, Deborah Peru, Roger Ellwood, Lynette Zaidel, LaTonya Kilpatrick, and Mark C Pierce

JTh3A.5 Optics and the Brain (BRAIN) 2018 View: PDF

Elemental analysis of mammary glands with laser induced breakdown spectroscopy

Irfan Ahmed and Condon Lau

JTh3A.50 Optics and the Brain (BRAIN) 2018 View: PDF

Noise Characteristics of a Single-pixel Macroscopic Fluorescence Lifetime Imaging System

Qi Pian, Ruoyang Yao, and Xavier Intes

JTh3A.51 Optics and the Brain (BRAIN) 2018 View: PDF

Mapping Cortical Effects of Childhood Malnutrition Using High-Density Diffuse Optical Tomography

Andrew Fishell, Ed Richter, Claudia Valdes, Marcela Rivera, Adam Eggebrecht, Christopher Smyser, Ana Maria Arbelaez, and Joseph Culver

JTh3A.52 Optics and the Brain (BRAIN) 2018 View: PDF

Functional Brain Connectivity Distinguishes Surgical Skill Learning with Surgical Simulators

Arun Nemani, Suvranu De, and Xavier Intes

JTh3A.53 Optics and the Brain (BRAIN) 2018 View: PDF

Spatiotemporal Characterization of Brain Function Via Multiplex Visibility Graph

Li Zhu, Sasan Haghani, and Laleh Najafizadeh

JTh3A.54 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative Assessment of Image Quality of Sparse Functional Near Infrared Spectroscopy vs High-Density Diffuse Optical Tomography

Tracy M. Burns-Yocum, Joseph P. Culver, and Adam T. Eggebrecht

JTh3A.55 Optics and the Brain (BRAIN) 2018 View: PDF

Transcranial Laser Stimulation Increases Power of Brain Oscillations and Information Flow Measured by EEG

Xinlong Wang, Jacek Dmochowski, F. Gonzalez-Lima, and Hanli Liu

JTh3A.56 Optics and the Brain (BRAIN) 2018 View: PDF

The Relationship Between the Slow Oscillation and Underlying Resting State Cortical Activity During Anesthesia and NREM Sleep

Lindsey M. Brier, Eric C. Landsness, Armand Mensen, Patrick W. Wright, Grant A. Baxter, Abraham Z. Snyder, Adam Q. Bauer, Jin-Moo Lee, and Joseph P. Culver

JTh3A.58 Optics and the Brain (BRAIN) 2018 View: PDF

Transmission Measurement of Brain Activity in vivo

Wen-Ju Pan, Jacob Billings, Maysam Nezafati, Waqas Majeed, and Shella Keilholz

JTh3A.59 Optics and the Brain (BRAIN) 2018 View: PDF

Tissue Oxygenation Maps of Diabetic Foot Ulcers: Longitudinal Studies

Cristianne Fernandez, Rebecca Kwasinski, Kevin Leiva, Richard Schutzman, Edwin Robledo, Penelope Kallis, Luis Borda, Francisco Perez-Clavijo, Robert Kirsner, and Anuradha Godavarty

JTh3A.6 Optics and the Brain (BRAIN) 2018 View: PDF

Designing large field-of-view two photon microscopy using optical invariant analysis

Jonathan R. Bumstead, Jasmine J. Park, Isaac A. Rosen, Andrew W. Kraft, Patrick W. Wright, Matthew D. Reisman, Daniel Côté, and Joseph P Culver

JTh3A.60 Optics and the Brain (BRAIN) 2018 View: PDF

Optical monitoring of oxygen saturation and tissue blood flow in skeletal muscle

Zhe Li, Jinchao Feng, Zhonghua Sun, Pengyu Liu, Kebin Jia, Wesley B. Baker, and Arjun G. Yodh

JTh3A.61 Optics and the Brain (BRAIN) 2018 View: PDF

Multi-wavelength time-resolved NIRS measurements in pigs during inflow and washout of ICG: Assessment of extracerebral signal contamination

Anna Gerega, Martyna Lachowska, Laura B. Morrison, Keith St Lawrence, and Adam Liebert

JTh3A.62 Optics and the Brain (BRAIN) 2018 View: PDF

Resting-State Functional Connectivity Measured By Diffuse Correlation Spectroscopy

Chien-Sing Poon, Jun Li, Jeremy Kress, Daniel J. Rohrbach, and Ulas Sunar

JTh3A.63 Optics and the Brain (BRAIN) 2018 View: PDF

Software Tools for Efficient Processing of High-Resolution 3D Images of Macroscopic Brain Samples

G. Mazzamuto, L. Silvestri, I. Costantini, F. Orsini, M. Roffilli, P. Frasconi, L. Sacconi, and F.S. Pavone

JTh3A.64 Optics and the Brain (BRAIN) 2018 View: PDF

Real-time volumetric microscopy of deep tissues with optoacoustic micro-tomography (OMT)

X. L. Deán-Ben, H. López-Schier, and D. Razansky

JTh3A.65 Optics and the Brain (BRAIN) 2018 View: PDF

Continuous Monitoring of Pediatric Extracorporeal Membrane Oxygenation with High-Sampling, Multichannel Near-Infrared Spectroscopy

Jenson Varghese, M. Craig Morriss, Hanli Liu, Lakshmi Raman, and Fenghua Tian

JTh3A.66 Optics and the Brain (BRAIN) 2018 View: PDF

Optical mapping of heart rhythm with voltage sensitive fluorescence dye in WT and FHF2KO hearts

Ernest W. Chang, Alejandra Leo-Macias, Glenn I. Fishman, and David S. Park

JTh3A.67 Optics and the Brain (BRAIN) 2018 View: PDF

Evaluating the aging of the scars after cancer removal by using multispectral diagnostic device

Marta Lange, Aleksey Lihachev, Emilija Vija Plorina, Aleksandrs Derjabo, Ilze Lihacova, Ilze Osina, Dmitrijs Bliznuks, and Janis Spigulis

JTh3A.7 Optics and the Brain (BRAIN) 2018 View: PDF

The Complex Evaluation of Breast Cancer Metabolism and Blood Supply in Neoadjuvant Polychemotherapy

M.V. Pavlov, T.I. Kalganova, G.Yu. Golubyatnikov, V.I. Plekhanov, L.V. Shkalova, A.G. Orlova, P.I. Rykhtik, I.V. Turchin, N.M. Shakhova, and A.V. Maslennikova

JTh3A.8 Optics and the Brain (BRAIN) 2018 View: PDF

JTh5A - Postdeadline Papers Session

Biomechanical changes in early-stage corneal disease and post-crosslinking measured in vivo with Brillouin microscopy

Amira M. Eltony, Peng Shao, Theo G. Seiler, Behrouz Tavakol, Roberto Pineda, Tobias Koller, Theo Seiler, and Seok-Hyun Yun

JTh5A.1 Optics and the Brain (BRAIN) 2018 View: PDF

Dual-color three-photon microscopy of neural tissue using a multiband MHz OPA

Lamiae Abdeladim, Khmaies Guesmi, Pierre Mahou, Samuel Tozer, Takuma Kumamoto, Julia Ferrer-Ortas, Nicolas Dray, Karine Loulier, Marc Hanna, Patrick Georges, Jean Livet, Willy Supatto, Frédéric Druon, and Emmanuel Beaurepaire

JTh5A.2 Optics and the Brain (BRAIN) 2018 View: PDF

Holographic multi-site Ca2+ imaging along thin dendrites of cortical pyramidal neurons

Michael L. Castanares and Vincent R. Daria

JTh5A.3 Optics and the Brain (BRAIN) 2018 View: PDF

Visualizing tumor progression with spiral volumetric optoacoustic tomography (SVOT)

A. Ron, S. Gottschalk, X. L. Deán-Ben, and D. Razansky

JTh5A.4 Optics and the Brain (BRAIN) 2018 View: PDF

Tissue biomechanics with nanobomb optical coherence elastography

Chih-Hao Liu, Dmitry Nevozhay, Konstantin V. Sokolov, and Kirill V. Larin

JTh5A.5 Optics and the Brain (BRAIN) 2018 View: PDF

A Novel 32 × 32, 224 Mevents/s Time Resolved SPAD Image Sensor for Near-Infrared Optical Tomography

Scott Lindner, Chao Zhang, Ivan Michel Antolovic, Alexander Kalyanov, Jingjing Jiang, Linda Ahnen, Aldo di Costanzo, Juan Mata Pavia, Salvador Sanchez Majos, Edoardo Charbon, and Martin Wolf

JTh5A.6 Optics and the Brain (BRAIN) 2018 View: PDF

JTu3A - Poster Tuesday

Fractal dimension-based similarity evaluation between retinal vessel segmentation images

Marco A. Escobar, J. R. Guzman-Sepulveda, and Rafael Guzmán-Cabrera

JTu3A.10 Optics and the Brain (BRAIN) 2018 View: PDF

In Vivo Retinal Imaging of Neuroinflammation in a Mouse Model of Traumatic Brain Injury

Olga Minaeva, James D. Akula, Mark W. Wojnarowicz, R. Daniel Ferguson, Mircea Mujat, Erich S. Franz, Andrew M. Fisher, Juliet A. Moncaster, Bertrand R. Huber, and Lee E. Goldstein

JTu3A.11 Optics and the Brain (BRAIN) 2018 View: PDF

Ho:YAG-Laser Induced Lithotripsy – in-vitro Investigation on Fragmentation, Dusting and Fluorescence

R. Sroka, T. Pongratz, S. Ströbl, F. Strittmatter, and M. Eisel

JTu3A.12 Optics and the Brain (BRAIN) 2018 View: PDF

A methodology to investigate the relationship between cancer cells cell-cycle phase and their migratory behaviors

Kamyar Esmaeili Pourfarhangi, Battuya Bayarmagnai, Edgar Cardenas de la Hoz, Andrew Cohen, and Bojana Gligorijevic

JTu3A.13 Optics and the Brain (BRAIN) 2018 View: PDF

Characterization of collagen structure by SHG in tumor models in-vitro

V. V. Dudenkova, I. N. Druzkhova, M. M. Lukina, M. V. Shirmanova, and E. V. Zagaynova

JTu3A.14 Optics and the Brain (BRAIN) 2018 View: PDF

Solving the Refractive Index – Thickness Ambiguity in Quantitative Phase Imaging of Primary Neurons in Culture with a Low-Cost Custom-Made 3D-Printed Perfusion Chamber

Erik Bélanger, Sébastien A. Lévesque, Émile Rioux-Pellerin, Jean-Michel Mugnes, Valérie Watters, Vincent Roy, Alyson Bernatchez, Gabriel Anctil, and Pierre Marquet

JTu3A.16 Optics and the Brain (BRAIN) 2018 View: PDF

Programmable illumination for multimodal microscopy using an electric paper (ePaper) display

Jing Wang, Eric Gerald, and Ryan McGorty

JTu3A.17 Optics and the Brain (BRAIN) 2018 View: PDF

Fluorescence Image Contrast Improvement by a Time-domain Method

Goro Nishimura

JTu3A.2 Optics and the Brain (BRAIN) 2018 View: PDF

Compact, low power consumption and low cost multi-exposure speckle contrast optical spectroscopy (SCOS) device for real-time measurement of deep tissue blood flow

Tanja Dragojević, Joseph L. Hollmann, Davide Portaluppi, Mauro Buttafava, Davide Tamborini, Joseph P. Culver, Federica Villa, and Turgut Durduran

JTu3A.20 Optics and the Brain (BRAIN) 2018 View: PDF

Digital depth-of-field expansion using contrast pyramid fusion algorithm for full-field optical angiography

Nanshou Wu, Mingyi Wang, Guojian Yang, and Yaguang Zeng

JTu3A.21 Optics and the Brain (BRAIN) 2018 View: PDF

Flexible Mid-infrared Photonic Chips for Real-time and Label-Free Biomedical Compounds Detection

Tiening Jin and Pao Tai Lin

JTu3A.22 Optics and the Brain (BRAIN) 2018 View: PDF

Validation of a novel wearable technology to estimate oxygen saturation level and lactate threshold power in the exercising muscle

Parisa Farzam, Zack Starkweather, and Maria A. Franceschini

JTu3A.23 Optics and the Brain (BRAIN) 2018 View: PDF

Automated data analysis for preclinical imaging of bioluminescent reporter systems

Alexander D. Klose, Kenneth Li, and Neal Paragas

JTu3A.24 Optics and the Brain (BRAIN) 2018 View: PDF

A Tool for Quantitative and Systematic Simulation of Diffuse Optical Tomography with a Limited Number of Fixed Sources and Detectors

Edoardo Ferocino, Antonio Pifferi, Simon Arridge, Fabrizio Martelli, Paola Taroni, and Andrea Farina

JTu3A.25 Optics and the Brain (BRAIN) 2018 View: PDF

System Configuration Optimization for Mesoscopic Fluorescence Molecular Tomography

Fugang Yang, Ruoyang Yao, Yuwen Lu, Wei Zhou, Denzel Faulkner, and Xavier Intes

JTu3A.26 Optics and the Brain (BRAIN) 2018 View: PDF

Deep Learning Classification of Cartilage Integrity Using Near Infrared Spectroscopy

Isaac O Afara, Jaakko K Sarin, Simo Ojanen, Mikko Finnila, Walter Herzog, Simo Saarakkala, Rami K Korhonen, and Juha Töyräs

JTu3A.27 Optics and the Brain (BRAIN) 2018 View: PDF

A Reconstruction Algorithm for Bioluminescence Tomography Based on Sparse and Total Variation Regularizations

Jinchao Feng, Yanan Li, Zhe Li, Zhonghua Sun, and Kebin Jia

JTu3A.28 Optics and the Brain (BRAIN) 2018 View: PDF

Image Resolution Improvements in Optical Imaging: Comparison of Angular vs. Time-domain Restriction of Highly Scattered Photons

Lagnojita Sinha, Jovan G. Brankov, and Kenneth M. Tichauer

JTu3A.29 Optics and the Brain (BRAIN) 2018 View: PDF

A Six-Channel Multispectral Imager for Simultaneous In Vivo Imaging of Multiple Near-Infrared Fluorescent Markers

Missael Garcia, Tyler Davis, Kevin Kauffman, Radoslav Marinov, and Viktor Gruev

JTu3A.3 Optics and the Brain (BRAIN) 2018 View: PDF

Efficient Jacobian Construction for Hyperspectral Wide-field Diffuse Optical Tomography via “Replay” Monte Carlo

Ruoyang Yao, Xavier Intes, and Qianqian Fang

JTu3A.30 Optics and the Brain (BRAIN) 2018 View: PDF

Frequency Selection with Optical Property Uncertainty Estimates for Spatial Frequency Domain Imaging

Vivian Pera, Kavon Karrobi, Syeda Tabassum, Fei Teng, and Darren Roblyer

JTu3A.31 Optics and the Brain (BRAIN) 2018 View: PDF

Nonlocal Differential Operators Improve Image Reconstruction in Diffuse Optical Tomography

Wenqi Lu and Iain B. Styles

JTu3A.32 Optics and the Brain (BRAIN) 2018 View: PDF

Line-field confocal optical coherence tomography operating simultaneously at 760 nm and 1270 nm center wavelengths

Arthur Davis, Olivier Levecq, Hicham Azimani, David Siret, and Arnaud Dubois

JTu3A.33 Optics and the Brain (BRAIN) 2018 View: PDF

Cellular Viability Imaging with DLS-OCT

Julia Lee, Collin Polucha, and Jonghwan Lee

JTu3A.34 Optics and the Brain (BRAIN) 2018 View: PDF

Coupling Polarisation Sensitive Optical Coherence Tomography and Mechanical Indentation to Assess Cartilage Degeneration

Matthew Goodwin, Ashvin Thambyah, and Frédérique Vanholsbeeck

JTu3A.35 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative OCT of living rat kidney

Yuhong Fang, Weijun Li, Kui Dong, Wei Gong, Shusen Xie, and Zheng Huang

JTu3A.36 Optics and the Brain (BRAIN) 2018 View: PDF

Algebraic calculation of back-projection operators in optoacoustic tomography

Amir Rosenthal

JTu3A.37 Optics and the Brain (BRAIN) 2018 View: PDF

In vivo quantifying molecular specificity of Y2O2S:Eu:Mg:Ti with dynamic fluorescence imaging

Yunpeng Dai, Xueli Chen, Yuzhu Gong, Xu Cao, Yonghua Zhan, and Jimin Liang

JTu3A.38 Optics and the Brain (BRAIN) 2018 View: PDF

Significance of covariation between arterial blood pressure and total hemoglobin concentration in Coherent Hemodynamics Spectroscopy

Angelo Sassaroli, Kristen T. Tgavalekos, and Sergio Fantini

JTu3A.39 Optics and the Brain (BRAIN) 2018 View: PDF

Optimization and Validation of BODIPY for Quantification of Steatosis in Donor Transplant Livers

Carly Askinas, Kate Elfer, David Tulman, Samuel Luethy, Gretchen Galliano, Ari Cohen, and J. Quincy Brown

JTu3A.4 Optics and the Brain (BRAIN) 2018 View: PDF

Correlation of EEG with Intercranial Pressure and Cerebral Hemodynamics during Burst-Supression

Jason Yang, Alexander Ruesch, Samantha Schmitt, Matthew A. Smith, and Jana M. Kainerstorfer

JTu3A.40 Optics and the Brain (BRAIN) 2018 View: PDF

Deep Tissue Multi-Wavelength Spatial Frequency Domain Imaging

Constance M. Robbins, Guruprasad Raghavan, Jason Yang, James F. Antaki, and Jana M. Kainerstorfer

JTu3A.41 Optics and the Brain (BRAIN) 2018 View: PDF

Discrimination of Healthy Skin and Cutaneous Malignant Lesions using FTIR Spectra and their Second Derivatives: A Comparative Study

Cassio Lima and Denise Zezell

JTu3A.42 Optics and the Brain (BRAIN) 2018 View: PDF

Evaluation of phantoms with various water and lipid contents by using a six-wavelength time-resolved spectroscopy system

E. Ohmae, H. Suzuki, K. Yoshimoto, S. Homma, N. Suzuki, H. Wada, T. Mimura, N. Yoshizawa, H. Ogura, H. Nasu, H. Sakahara, Y. Yamashita, and Y. Ueda

JTu3A.43 Optics and the Brain (BRAIN) 2018 View: PDF

Pseudo-time Ensemble Kalman Filtering for Ultrasound Modulated Optical Tomography

Saurabh Gupta, Tara Raveendran, Ram Mohan Vasu, and Debasish Roy

JTu3A.46 Optics and the Brain (BRAIN) 2018 View: PDF

All-Optical Simultaneous Stimulation and Readout of Motor Cortex Activity in Awake Mice

Francesco Resta, Emilia Conti, Elena Montagni, Leonardo Sacconi, Anna Letizia Allegra Mascaro, and Francesco Saverio Pavone

JTu3A.47 Optics and the Brain (BRAIN) 2018 View: PDF

Cell Counting in Targeted Nuclei of Whole Brain Two-Photon Image Data

Gerald Moore, Polona Jager, Alessio Delogu, Simon Schultz, and Stephen Brickley

JTu3A.48 Optics and the Brain (BRAIN) 2018 View: PDF

Assessment of complete hemodynamic characteristics of in vivo tissues using a non-contact laser Doppler and total diffuse reflectance spectroscopy system

Juan Giraldo, Anthony Giordano, Mohamed Almadi, and Wei-Chiang Lin

JTu3A.49 Optics and the Brain (BRAIN) 2018 View: PDF

Multimodal Fast Optical-Electrical Imaging of Interictal Epileptic Spikes

Mahdi Mahmoudzadeh, Mana Manoochehri, Emilie Bourel, and Fabrice Wallois

JTu3A.5 Optics and the Brain (BRAIN) 2018 View: PDF

Towards spiroximetry in adult humans – how to increase amplitude of respiratory wave in an optical signal

Piotr Sawosz, Magdalena Morawiec, Wojciech Dabrowski, Przemyslaw Pulawski, Michal Kacprzak, Roman Maniewski, and Adam Liebert

JTu3A.50 Optics and the Brain (BRAIN) 2018 View: PDF

Improved sparse reconstruction for fluorescence molecular tomography with Poisson noise modeling

Yansong Zhu, Abhinav K. Jha, Dean F. Wong, and Arman Rahmim

JTu3A.51 Optics and the Brain (BRAIN) 2018 View: PDF

Generating High Quality Tetrahedral Meshes of the Human Head and Applications in fNIRS

Anh Phong Tran and Qianqian Fang

JTu3A.52 Optics and the Brain (BRAIN) 2018 View: PDF

Review of time-Domain Diffuse Correlation Spectroscopy: from theory to human subject studies

Davide Tamborini, Stefan Carp, Xiaojun Cheng, Bernhard B. Zimmermann, Casey Evans, Oleg Shatrovoy, Andrew Siegel, Erik Duerr, Megan Blackwell, David A. Boas, and Maria Angela Franceschini

JTu3A.53 Optics and the Brain (BRAIN) 2018 View: PDF

Noninvasive Continuous Optical Monitoring of Absolute Cerebral Blood Flow in Adult Human Subjects

Lian He, Wesley Baker, Daniel Milej, Venkaiah Kavuri, David Busch, Mamadou Diop, Keith St Lawrence, Ramni Balu, W. Andrew Kofke, and Arjun G. Yodh

JTu3A.54 Optics and the Brain (BRAIN) 2018 View: PDF

Novel X-ray Fluorescent Organic Monomer and Polymer Materials for Optogenetic Applications

David N. French, Kelli Cannon, Aundrea Bartley, Lori McMahon, and Gary M. Gray

JTu3A.55 Optics and the Brain (BRAIN) 2018 View: PDF

Wide field speckle imaging and two photon microscopy close up for the Investigation of cerebral blood flow in vivo in murine model of obesity.

Soleimanzad H., H Gurden, and F Pain

JTu3A.57 Optics and the Brain (BRAIN) 2018 View: PDF

Monte-Carlo lookup table-based inverse model for noninvasive quantification of cerebral optical properties in small animal using frequency-domain near-infrared spectroscopy

Seung Yup Lee, Corey Zheng, and Erin Buckley

JTu3A.58 Optics and the Brain (BRAIN) 2018 View: PDF

Monitoring acute stroke in mouse model using visible-light optical coherence tomography

Xiao Shu, Qi Liu, Siyu Chen, Shanbao Tong, and Hao F. Zhang

JTu3A.59 Optics and the Brain (BRAIN) 2018 View: PDF

Calibration of Low Cost, Portable Mueller Matrix Polarimeter

Mariacarla Gonzalez, Karla Montejo, Karl Krupp, Vijaya Srinivas, Edward DeHoog, Joseph Chue-Sang, Nicole Sevilla, Purnima Madhivanan, and Jessica Ramella-Roman

JTu3A.6 Optics and the Brain (BRAIN) 2018 View: PDF

Chronic Transcranial Fluorescence Imaging of Cortical Neurons with 3-Photon Microscopy

Kevin T. Takasaki, Matthew T. Valley, Emily Turschak, Rui Liu, and Jack Waters

JTu3A.60 Optics and the Brain (BRAIN) 2018 View: PDF

Optical imaging of endogenous lipid particles instructs on the dynamics and functions of the cerebrospinal fluid

Olivier Thouvenin, Yasmine Cantaut-Belarif, Jenna Sternberg, Pierre-Luc Bardet, and Claire Wyart

JTu3A.61 Optics and the Brain (BRAIN) 2018 View: PDF

Towards a Full Volumetric Atlas of Cell-specific Neuronal Spatial Organization in the Entire Mouse Brain

Ludovico Silvestri, Antonino Paolo Di Giovanna, Giacomo Mazzamuto, Trygve Leergard, Francesco Orsini, Irene Costantini, Jan Bjaalie, Paolo Frasconi, and Francesco Saverio Pavone

JTu3A.62 Optics and the Brain (BRAIN) 2018 View: PDF

Self-calibrated DCS for Monitoring Absolute Cerebral Blood Flow

Mahro Khalid, Daniel Milej, Ajay Rajaram, Androu Abdalmalak, Mamadou Diop, and Keith St Lawrence

JTu3A.63 Optics and the Brain (BRAIN) 2018 View: PDF

Mobile Phone Camera Based Near-Infrared Spectroscopy Measurements

Morris Vanegas, Stefan Carp, and Qianqian Fang

JTu3A.64 Optics and the Brain (BRAIN) 2018 View: PDF

Multiplexed molecular imaging with topically applied SERS nanoparticles for endoscopy and surgical guidance

Yu “Winston” Wang, Nicholas P. Reder, Soyoung Kang, Sara H. Javid, Suzanne M. Dintzis, and Jonathan T.C. Liu

JTu3A.65 Optics and the Brain (BRAIN) 2018 View: PDF

Optical Tomography Reconstruction to Recover Small Oriented Inclusions from Optically-Thick Diffusive Media

Edward Xu and Qianqian Fang

JTu3A.67 Optics and the Brain (BRAIN) 2018 View: PDF

High-speed Wide-field Photoacoustic Microscopy

Bangxin Lan, Wei Liu, and Junjie Yao

JTu3A.68 Optics and the Brain (BRAIN) 2018 View: PDF

Tissue Oxygenation Changes in Venous Leg Ulcers

Rebecca Kwasinski, Cristianne Fernandez, Kevin Leiva, Richard Schutzman, Edwin Robledo, Penelope Kallis, Luis Borda, Francisco Perez-Clavijo, Robert Kirsner, and Anuradha Godavarty

JTu3A.7 Optics and the Brain (BRAIN) 2018 View: PDF

Spatial Regularisation based Reconstruction of Quantitative Fluorescence Imaging

Yijing Xie, Michael Ebner, Victoria Wykes, Anna Miserocchi, Andrew W McEvoy, Sébastien Ourselin, and Tom Vercauteren

JTu3A.8 Optics and the Brain (BRAIN) 2018 View: PDF

Threshold value based Photodynamic Therapy treatment planning using Full Monte

Abdul-Amir Yassine, William Kingsford, Jeff Cassidy, Vaughn Betz, and Lothar Lilge

JTu3A.9 Optics and the Brain (BRAIN) 2018 View: PDF

JW3A - Poster Wednesday

A Vascular Optical Spectroscopic Measurement (VOSM) System for Monitoring Peripheral Artery Disease Patients

Christopher J. Fong, Jennifer W. Hoi, Willis Y. Kim, Hyun K. Kim, and Andreas H. Hielscher

JW3A.1 Optics and the Brain (BRAIN) 2018 View: PDF

Continuous and Minimally Invasive Measurement of Blood Flow in the Spinal Cord

David R. Busch, Wei Lin, Alissa Cutrone, Brandon J. Kovarovic, Jakub Tatka, Chia Chieh Goh, Arjun G. Yodh, Janies Barsi, and Thomas F. Floyd

JW3A.10 Optics and the Brain (BRAIN) 2018 View: PDF

Mid-Infrared Photonic Chip for Label-free Glucose Sensing

Pao Tai Lin

JW3A.11 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative Analyses on Second Harmonic Generation Microscopy Images of Collagen in Ex Vivo Basal Cell Carcinoma Samples in Comparison to Normal Skin

Norbert Kiss, Dóra Haluszka, Kende Lőrincz, Szabolcs Bozsányi, Norbert Wikonkál, and Róbert Szipőcs

JW3A.12 Optics and the Brain (BRAIN) 2018 View: PDF

Biomaterials as second harmonic probes for bioimaging and diagnostic applications

Ming Ni and Shuangmu Zhuo

JW3A.13 Optics and the Brain (BRAIN) 2018 View: PDF

Temporal deep learning classification of digital hologram reconstructions of multicellular samples

Tomi Pitkäaho, Aki Manninen, and Thomas J. Naughton

JW3A.14 Optics and the Brain (BRAIN) 2018 View: PDF

Novel fluorescence imaging approach in deep tissue based on sonoluminescence

Hao Yang, Chaolong Song, and Huabei Jiang

JW3A.16 Optics and the Brain (BRAIN) 2018 View: PDF

Role of refractive index mismatch in backward nonlinear optical imaging

Jarno N. van der Kolk, Charalambos Kioulos, Antonino Calà Lesina, Stéphane Bancelin, François Légaré, and Lora Ramunno

JW3A.17 Optics and the Brain (BRAIN) 2018 View: PDF

Fast, High-Quality Histology of Cleared Tissue Samples by Polygon-Based Multiphoton Microscopy

Eben Olson, Michael J. Levene, and Richard Torres

JW3A.18 Optics and the Brain (BRAIN) 2018 View: PDF

Focusing through mouse skull using wavefront shaping

Nektarios Koukourakis, Moritz Kreysing, and Jürgen Czarske

JW3A.19 Optics and the Brain (BRAIN) 2018 View: PDF

PV[O]H Signals Intravascular Blood Loss in the Rat

Bin Deng, Seth Fillioe, Paul Dent, Charles M. Peterson, Jim Mostrom, Richard Steinmann, Joshua Satalin, Jerry Goodisman, Gary F. Nieman, Sriram Narsipur, and J. Chaiken

JW3A.2 Optics and the Brain (BRAIN) 2018 View: PDF

Fast Diffuse Correlation Spectroscopy with Low-Cost Microcontroller

Arindam Biswas, Dillon A. Buffone, and Ashwin B. Parthasarathy

JW3A.20 Optics and the Brain (BRAIN) 2018 View: PDF

Simulating DCT and SCOT in the transport regime

Ugo Tricoli, Callum M. Macdonald, Turgut Durduran, Anabela Da Silva, and Vadim A. Markel

JW3A.21 Optics and the Brain (BRAIN) 2018 View: PDF

Diffuse Correlation Tomography Geometry Optimization with Genetic Algorithm Using Singular Value Analysis

Vincent Ching-Roa, Songfeng Han, Jingxuan Ren, Gabriel A. Ramirez, Seung Hyun Kim, and Regine Choe

JW3A.22 Optics and the Brain (BRAIN) 2018 View: PDF

All Optical Real Time Method for Laser Speckle Pattern Tracking of Non-Contact Biomedical Parameters

Ran Califa, Mark Golberg, Ariel Schwarz, Nisan Ozana, Zeev Markman, Javier García, Amir Shemer, and Zeev Zalevsky

JW3A.23 Optics and the Brain (BRAIN) 2018 View: PDF

Novel Approach to Spatial Frequency Domain Fluorescence Diffuse Optical Tomography for Tumor Imaging

Sang Hoon Chong, Vadim A. Markel, Ashwin B. Parthasarathy, Yi Hong Ong, Frank A. Moscatelli, and Arjun G. Yodh

JW3A.25 Optics and the Brain (BRAIN) 2018 View: PDF

An Approach to Improve Temporal Response of Single Photon Avalanche Photodiode for Time-resolved Diffuse Optical Tomography (DOT)

Ahmed C. Kadhim, Ahmad S. Azzahrani, and Susan K Earles

JW3A.26 Optics and the Brain (BRAIN) 2018 View: PDF

Non-Invasive Assessment of Deep Buried Flap Viability with Time-Resolved Optical Monitoring: Results on Pigs

Anne Planat-Chrétien, Audrey DOT, Mathieu Perriollat, Michel Berger, Rodolphe Lartizien, Jean-Luc Coll, and Georges Bettega

JW3A.27 Optics and the Brain (BRAIN) 2018 View: PDF

Laparoscopic Diffuse Optical Spectroscopy of Underlying Vessel Structures: A Model of the Detectability of a Long Cylindrical Inclusion Bisecting the Source-detector Pair

Daqing Piao and Sanjay G. Patel

JW3A.28 Optics and the Brain (BRAIN) 2018 View: PDF

Estimating Mechanical Properties of Bovine Knee Ligaments and Tendons with Near Infrared Spectroscopy

Jari E. Torniainen, Aapo Ristaniemi, Lauri Stenroth, and Juha Töyräs

JW3A.29 Optics and the Brain (BRAIN) 2018 View: PDF

Automated Handling Device for Circumferential Gigapixel Microscopy of Whole Prostate Resections

Sam Luethy and J. Quincy Brown

JW3A.3 Optics and the Brain (BRAIN) 2018 View: PDF

How Should the New Generation of Detectors for Diffuse Optics Be? A Systematic Simulation Study

Laura Di Sieno, Anurag Behera, Antonio Pifferi, Fabrizio Martelli, and Alberto Dalla Mora

JW3A.30 Optics and the Brain (BRAIN) 2018 View: PDF

Spatially-enhanced Data Analysis Method for Time-resolved NIRS to Determine Tissue Optical Properties

Lin Yang, Heidrun Wabnitz, Dirk Grosenick, Thomas Gladytz, and Rainer Macdonald

JW3A.31 Optics and the Brain (BRAIN) 2018 View: PDF

Adaptability and Performance of Low-Cost OCT System for use in Benchtop Optical Coherence Microscopy

Evan T. Jelly, Yang Zhao, Michael Crose, Sanghoon Kim, Brian Cox, Ge Song, and Adam Wax

JW3A.32 Optics and the Brain (BRAIN) 2018 View: PDF

Optogenetic Cardiac Control in Drosophila Using Red-light

Jing Men, Angelika Wyzlic, Luisa Göpfert, Airong Li, Rudolph Tanzi, and Chao Zhou

JW3A.33 Optics and the Brain (BRAIN) 2018 View: PDF

Data Compression of Time-lapse Optical Coherence Tomography Images Based On Low-rank Plus Sparse Reconstruction

Yuye Ling, James P. McLean, and Christine P. Hendon

JW3A.35 Optics and the Brain (BRAIN) 2018 View: PDF

Multiscale optoacoustic measurements of blood oxygen saturation in VIS-NIR wavelength range with the ultrawideband ultrasonic detector: an in vitro study

V. Perekatova, I. Turchin, M. Kirillin, D. Loginova, and P. Subochev

JW3A.36 Optics and the Brain (BRAIN) 2018 View: PDF

Discrimination of ionizing radiation effects on bone using Fourier Transform Infrared Spectroscopy using K-means

Pedro Arthur Augusto de Castro and Denise M. Zezell

JW3A.37 Optics and the Brain (BRAIN) 2018 View: PDF

Near-infrared Spectroscopy: a Potential Tool for Mapping Meniscus Properties

Juho Ala-Myllymäki, Juha Töyräs, and Isaac O Afara

JW3A.38 Optics and the Brain (BRAIN) 2018 View: PDF

Submicron position-resolved Raman spectra for characterizing laser-trapped single airborne particles

Aimable Kalume, Chuji Wang, Joshua Santarpia, and Yong-Le Pan

JW3A.39 Optics and the Brain (BRAIN) 2018 View: PDF

LED-based photoacoustic imaging of medical devices with carbon nanotube-polydimethylsiloxane composite coatings

Wenfeng Xia, Sacha Noimark, Efthymios Maneas, Mithun Kuniyil Ajith Singh, Sebastien Ourselin, Simeon J. West, and Adrien E. Desjardins

JW3A.4 Optics and the Brain (BRAIN) 2018 View: PDF

Depth-Resolved Measurements of Oscillatory Hemodynamics in Cerebral Near-Infrared Spectroscopy

Kosar Khaksari, Angelo Sassaroli, Kristen Tgavalekos, and Sergio Fantini

JW3A.40 Optics and the Brain (BRAIN) 2018 View: PDF

Light transport modeling for accurate pressure modulation calibration of extra-cerebral contribution to DCS cerebral blood flow monitoring in adult subjects

Stefan A. Carp, Parisa Farzam, Parya Farzam, Juliette Selb, Jason Qu, and Maria A. Franceschini

JW3A.41 Optics and the Brain (BRAIN) 2018 View: PDF

Rapid and in situ optical detection of trace lithium in tissue

Condon Lau and Irfan Ahmed

JW3A.42 Optics and the Brain (BRAIN) 2018 View: PDF

Advances in Single-Photon Detection and Timing for Time Domain Multi-Wavelength Optical Mammography

Edoardo Ferocino, Edoardo Martinenghi, Alberto Dalla Mora, Antonio Pifferi, Rinaldo Cubeddu, and Paola Taroni

JW3A.43 Optics and the Brain (BRAIN) 2018 View: PDF

Coregistered and Segmented Tissue Oxygenation Maps onto White Light Images of Diabetic Foot Ulcers

Edwin Robledo, Richard Schutzman, Cristianne Fernandez, Ruogu Fang, Kevin Leiva, Rebecca Kwasinski, Penelope Kallis, Luis Borda, Robert Kirsner, Francisco Perez-Clavijo, and Anuradha Godavarty

JW3A.44 Optics and the Brain (BRAIN) 2018 View: PDF

Multi-wavelengths Photo Magnetic Imaging

Farouk Nouizi, Hakan Erkol, Alex Luk, Maha Algarawi, Mehrnaz Mehrabi, and Gultekin Gulsen

JW3A.45 Optics and the Brain (BRAIN) 2018 View: PDF

Quantitative optical discrimination of benign and malignant human colon pathologies using spatial frequency domain modulated imaging

Sreyankar Nandy, William Chapman, Rehan Rais, Ivan Gonzalez, Deyali Chatterjee, Matthew Mutch, and Quing Zhu

JW3A.46 Optics and the Brain (BRAIN) 2018 View: PDF

Separating systemic and functional components of the hemodynamic signal: a comparison using two techniques

Amber Williams, Karthik Vishwanath, Rebeca Garcia, and Vrinda Kalia

JW3A.47 Optics and the Brain (BRAIN) 2018 View: PDF

Learning Biomarkers of Disease from Non-Invasive Measurements of Blood Flow

Jakob Krzyston, Seung Yup Lee, Erin M. Buckley, and Eva L. Dyer

JW3A.48 Optics and the Brain (BRAIN) 2018 View: PDF

Hybrid broadband NIRS/Diffuse correlation spectroscopy system for simultaneous monitoring of cerebral perfusion and cytochrome c oxidase

Ajay Rajaram, Gemma Bale, Matthew Kewin, Ilias Tachtsidis, Keith Lawrence, and Mamadou Diop

JW3A.50 Optics and the Brain (BRAIN) 2018 View: PDF

Improvements in functional diffuse optical tomography maps by global motion censoring techniques

Arefeh Sherafati, Adam T. Eggebrecht, Karla M. Bergonzi, Tracy M. Burns-Yocum, and Joseph P. Culver

JW3A.51 Optics and the Brain (BRAIN) 2018 View: PDF

Importance of left dorsolateral prefrontal cortex in moral judgment using functional near-infrared spectroscopy

Hadis Dashtestani, Rachel Zaragoza, Riley Kermanian, Kristine M. Knutson, Milton Halem, Fatima Chowdhry, Nader Shahni Karamzadeh, Afrouz A. Anderson, A. Claude Boccara, and Amir Gandjbakhche

JW3A.52 Optics and the Brain (BRAIN) 2018 View: PDF

Ca2+ Decomposition into Signal and Noise Components for Multisite Ca2+ Imaging

Mariana C. Potcoava, Shelagh Rodriguez, and Simon Alford

JW3A.53 Optics and the Brain (BRAIN) 2018 View: PDF

Optical Monitoring of Cerebral Hemodynamics in Acute Stroke Patients During Mechanical Thrombectomy

Parisa Farzam, Henrikas Vaitkevicius, Mohammad A. Aziz-Sultan, Alfred P. See, Parya Farzam, Maria A. Franceschini, and Nirav J. Patel

JW3A.54 Optics and the Brain (BRAIN) 2018 View: PDF

Mechanistic Understanding of Transcranial Photobiomodulation Stimulated by Infrared Laser on the Human Forehead

Xinlong Wang, Divya D. Reddy, Sahil S. Nalawade, Douglas Barrett, F. Gonzalez-Lima, and Hanli Liu

JW3A.55 Optics and the Brain (BRAIN) 2018 View: PDF

Does Light Propagate Better Along Pyramidal Apical Dendrites in Cerebral Cortex?

Martin Thunemann, Torbjørn V. Ness, Kıvılcım Kılıç, Christopher G. L. Ferri, Sava Sakadzic, Anders M. Dale, Yeshaiahu Fainman, David A. Boas, Gaute T. Einevoll, and Anna Devor

JW3A.56 Optics and the Brain (BRAIN) 2018 View: PDF

Refined Utah Optrode Array and µLED Array for Deep Cortical Optogenetic Stimulation in Primates

Robert Scharf, Christopher Reiche, Niall McAlinden, Yunzhou Cheng, Rohit Sharma, Enyuan Xie, Prashant Tathireddy, Alessandra Angelucci, Christine Kallmayer, Keith Mathieson, Loren Rieth, and Steve Blair

JW3A.57 Optics and the Brain (BRAIN) 2018 View: PDF

Serial optical coherence scanner for imaging neurodegenerative diseases

Chao J. Liu, Orion Rainwater, Harry T. Orr, and Taner Akkin

JW3A.58 Optics and the Brain (BRAIN) 2018 View: PDF

Detecting Ultra-low Light Level Signals with Optical Fiber Probe for Intrinsic Neural Signals in vivo

Wen-Ju Pan, Waqas Majeed, Jacob Billings, and Shella Keilholz

JW3A.59 Optics and the Brain (BRAIN) 2018 View: PDF

3D Computational Cytology Using Dual-view Inverted Selective Plane Illumination Microscopy (diSPIM)

Bihe Hu, Daniel Bolus, Katherine Elfer, Carly Swan, Jay Tellis, and J. Quincy Brown

JW3A.6 Optics and the Brain (BRAIN) 2018 View: PDF

MesoScope Upgrade: Dual Plane Remote Focusing System for Recording of Ca2+ Signals in Neural Ensembles

Dmitri Tsyboulski, Natalia Orlova, Jerome Lecoq, and Peter Saggau

JW3A.60 Optics and the Brain (BRAIN) 2018 View: PDF

Design of a Wavefront-Engineered Multiphoton Microscope (WEMM) for Imaging Awake and Behaving Mice

Rui Liu, Neil Ball, Jim Brockill, Jun Zhuang, Casey Whites, Lenard Kuan, Ryan Valenza, Arielle Steger, Shig Nishiwaki, David Sullivan, Cliff Slaughterbeck, Colin Farrell, Jerome Lecoq, and Peter Saggau

JW3A.61 Optics and the Brain (BRAIN) 2018 View: PDF

Dual-color three-photon microscopy for deep imaging of neural tissue

Lamiae Abdeladim, Khmaies Guesmi, Pierre Mahou, Samuel Tozer, Takuma Kumamoto, Karine Loulier, Jean Livet, Frédéric Druon, Willy Supatto, and Emmanuel Beaurepaire

JW3A.62 Optics and the Brain (BRAIN) 2018 View: PDF

Simultaneous monitoring of intravascular and extravascular oxygen tension and cerebral blood flow in rat brain during forepaw stimulation

Sanghoon Chong, Yi Hong Ong, Mirna El Khatib, Tatiana V. Esipova, Ashwin B. Parthasarathy, Joel H. Greenberg, Arjun G. Yodh, and Sergei A. Vinogradov

JW3A.63 Optics and the Brain (BRAIN) 2018 View: PDF

Comparison of Cerebral Blood Flow Measurements with Diffuse Correlation Spectroscopy and Coherent Hemodynamics Spectroscopy

Thao T. Pham, Kristen T. Tgavalekos, Angelo Sassaroli, Nishanth A. Krishnamurthy, and Sergio Fantini

JW3A.64 Optics and the Brain (BRAIN) 2018 View: PDF

Mechanisms of Vascular Function in Cerebrospinal Fluid Waste Metabolites Clearance Perivascular System

Xinglei Liu, Yiming Cheng, James Haorah, and Kevin D. Belfield

JW3A.65 Optics and the Brain (BRAIN) 2018 View: PDF

Blood Flow Biomarkers Measured with Diffuse Correlation Spectroscopy Elucidate Mechanisms of Cognitive Dysfunction After Repetitive Concussion

Levi Wood, Alyssa Pybus, Bharat Sanders, Amanda Liew, and Erin M. Buckley