Endoscopic optical coherence tomography: technologies and clinical applications [Invited]

Michalina J. Gora, Melissa J. Suter, Guillermo J. Tearney, and Xingde Li

Biomed. Opt. Express 8(5), 2405-2444 (2017)  View: HTML | PDF

Using speckle to measure tissue dispersion in optical coherence tomography

Christos Photiou, Evgenia Bousi, Ioanna Zouvani, and Costas Pitris

Biomed. Opt. Express 8(5), 2528-2535 (2017)  View: HTML | PDF

Review of adaptive optics OCT (AO-OCT): principles and applications for retinal imaging [Invited]

Michael Pircher and Robert J Zawadzki

Biomed. Opt. Express 8(5), 2536-2562 (2017)  View: HTML | PDF

Intravascular optical coherence tomography [Invited]

Brett E. Bouma, Martin Villiger, Kenichiro Otsuka, and Wang-Yuhl Oh

Biomed. Opt. Express 8(5), 2660-2686 (2017)  View: HTML | PDF

Pre-clinical longitudinal monitoring of hemodynamic response to anti-vascular chemotherapy by hybrid diffuse optics

Parisa Farzam, Johannes Johansson, Miguel Mireles, Gabriela Jiménez-Valerio, Mar Martínez-Lozano, Regine Choe, Oriol Casanovas, and Turgut Durduran

Biomed. Opt. Express 8(5), 2563-2582 (2017)  View: HTML | PDF

Optimization of fluorescent imaging in the operating room through pulsed acquisition and gating to ambient background cycling

Kristian J. Sexton, Yan Zhao, Scott C. Davis, Shudong Jiang, and Brian W. Pogue

Biomed. Opt. Express 8(5), 2635-2648 (2017)  View: HTML | PDF

Fluorescence lifetime microscopy of NADH distinguishes alterations in cerebral metabolism in vivo

Mohammad A. Yaseen, Jason Sutin, Weicheng Wu, Buyin Fu, Hana Uhlirova, Anna Devor, David A. Boas, and Sava Sakadžić

Biomed. Opt. Express 8(5), 2368-2385 (2017)  View: HTML | PDF

Reconstruction of super-resolution STORM images using compressed sensing based on low-resolution raw images and interpolation

Tao Cheng, Danni Chen, Bin Yu, and Hanben Niu

Biomed. Opt. Express 8(5), 2445-2457 (2017)  View: HTML | PDF

STED imaging performance estimation by means of Fourier transform analysis

David Merino, Arrate Mallabiabarrena, Jordi Andilla, David Artigas, Timo Zimmermann, and Pablo Loza-Alvarez

Biomed. Opt. Express 8(5), 2472-2482 (2017)  View: HTML | PDF

Adaptive optics two-photon excited fluorescence lifetime imaging ophthalmoscopy of exogenous fluorophores in mice

James A. Feeks and Jennifer J. Hunter

Biomed. Opt. Express 8(5), 2483-2495 (2017)  View: HTML | PDF

Structured illumination multimodal 3D-resolved quantitative phase and fluorescence sub-diffraction microscopy

Shwetadwip Chowdhury, Will J. Eldridge, Adam Wax, and Joseph A. Izatt

Biomed. Opt. Express 8(5), 2496-2518 (2017)  View: HTML | PDF

Focus scanning with feedback-control for fiber-optic nonlinear endomicroscopy

Ang Li, Wenxuan Liang, Honghua Guan, Yung-Tian A. Gau, Dwight E. Bergles, and Xingde Li

Biomed. Opt. Express 8(5), 2519-2527 (2017)  View: HTML | PDF

Three-dimensional reconstruction and measurements of zebrafish larvae from high-throughput axial-view in vivo imaging

Yuanhao Guo, Wouter J. Veneman, Herman P. Spaink, and Fons J. Verbeek

Biomed. Opt. Express 8(5), 2611-2634 (2017)  View: HTML | PDF

Assessment of mental stress effects on prefrontal cortical activities using canonical correlation analysis: an fNIRS-EEG study

Fares Al-Shargie, Tong Boon Tang, and Masashi Kiguchi

Biomed. Opt. Express 8(5), 2583-2598 (2017)  View: HTML | PDF

In vivo volumetric quantitative micro-elastography of human skin

Shaghayegh Es’haghian, Kelsey M. Kennedy, Peijun Gong, Qingyun Li, Lixin Chin, Philip Wijesinghe, David D. Sampson, Robert A. McLaughlin, and Brendan F. Kennedy

Biomed. Opt. Express 8(5), 2458-2471 (2017)  View: HTML | PDF

Automatic and robust segmentation of endoscopic OCT images and optical staining

Jianlin Zhang, Wu Yuan, Wenxuan Liang, Shanyong Yu, Yanmei Liang, Zhiyong Xu, Yuxing Wei, and Xingde Li

Biomed. Opt. Express 8(5), 2697-2708 (2017)  View: HTML | PDF  [Suppl. Mat. (1)]

Assessment of eye length changes in accommodation using dynamic extended-depth OCT

Yu-Cherng Chang, Keke Liu, Carolina de Freitas, Alex Pham, Florence Cabot, Siobhan Williams, Ethan Adre, Giovanni Gregori, Marco Ruggeri, Sonia H. Yoo, Arthur Ho, Jean-Marie Parel, and Fabrice Manns

Biomed. Opt. Express 8(5), 2709-2719 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]

Noise adaptive wavelet thresholding for speckle noise removal in optical coherence tomography

Farzana Zaki, Yahui Wang, Hao Su, Xin Yuan, and Xuan Liu

Biomed. Opt. Express 8(5), 2720-2731 (2017)  View: HTML | PDF

Automatic segmentation of nine retinal layer boundaries in OCT images of non-exudative AMD patients using deep learning and graph search

Leyuan Fang, David Cunefare, Chong Wang, Robyn H. Guymer, Shutao Li, and Sina Farsiu

Biomed. Opt. Express 8(5), 2732-2744 (2017)  View: HTML | PDF

Design and evaluation of a compound acoustic lens for photoacoustic computed tomography

Shirui Yang, Wei Qin, Heng Guo, Tian Jin, Na Huang, Ming He, and Lei Xi

Biomed. Opt. Express 8(5), 2756-2765 (2017)  View: HTML | PDF

Evaluation of non-thermal plasma-induced anticancer effects on human colon cancer cells

Jae-Sun Choi, Jeongho Kim, Young-Jun Hong, Woom-Yee Bae, Eun Ha Choi, Joo-Won Jeong, and Hun-Kuk Park

Biomed. Opt. Express 8(5), 2649-2659 (2017)  View: HTML | PDF

Ocular damage effects from 1338-nm pulsed laser radiation in a rabbit eye model

Luguang Jiao, Jiarui Wang, Xiaomin Jing, Hongxia Chen, and Zaifu Yang

Biomed. Opt. Express 8(5), 2745-2755 (2017)  View: HTML | PDF

Functional imaging of neuronal activity of auditory cortex by using Cal-520 in anesthetized and awake mice

Jingcheng Li, Jianxiong Zhang, Meng Wang, Junxia Pan, Xiaowei Chen, and Xiang Liao

Biomed. Opt. Express 8(5), 2599-2610 (2017)  View: HTML | PDF

Three-dimensional MRI study of the relationship between eye dimensions, retinal shape and myopia

James M. Pope, Pavan K. Verkicharla, Farshid Sepehrband, Marwan Suheimat, Katrina L. Schmid, and David A. Atchison

Biomed. Opt. Express 8(5), 2386-2395 (2017)  View: HTML | PDF

Achromatic doublet intraocular lens for full aberration correction

Enrique J. Fernandez and Pablo Artal

Biomed. Opt. Express 8(5), 2396-2404 (2017)  View: HTML | PDF

Quadratic divergence regularized SVM for optic disc segmentation

Jun Cheng, Dacheng Tao, Damon Wing Kee Wong, and Jiang Liu

Biomed. Opt. Express 8(5), 2687-2696 (2017)  View: HTML | PDF

Digital micromirror device based ophthalmoscope with concentric circle scanning

Mathi Damodaran, Kari V. Vienola, Boy Braaf, Koenraad A. Vermeer, and Johannes F. de Boer

Biomed. Opt. Express 8(5), 2766-2780 (2017)  View: HTML | PDF  [Suppl. Mat. (2)]