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OSA Publishing

1 January 2021, Volume 12, Issue 1, pp. 1-688   44 articles

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Introduction to the Biophotonics Congress 2020 feature issue

Biomed. Opt. Express 12(1), 509-510 (2021)  View: HTML | PDF

Review

Applications of augmented reality in ophthalmology [Invited]

Biomed. Opt. Express 12(1), 511-538 (2021)  View: HTML | PDF

Endoscopy and Fiber Optics

Dual GRIN lens two-photon endoscopy for high-speed volumetric and deep brain imaging

Biomed. Opt. Express 12(1), 162-172 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Excitation-scanning hyperspectral video endoscopy: enhancing the light at the end of the tunnel

Biomed. Opt. Express 12(1), 247-271 (2021)  View: HTML | PDF

Editors' Pick

Highly flexible fiber delivery of a high peak power nanosecond Nd:YAG laser beam for flexiscopic applications

Biomed. Opt. Express 12(1), 444-461 (2021)  View: HTML | PDF

Microfluidic Optical Devices

Lightsheet-based flow cytometer for whole blood with the ability for the magnetic retrieval of objects from the blood flow

Biomed. Opt. Express 12(1), 380-394 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Microscopy

Linear diattenuation imaging of biological tissues with near infrared Mueller scanning microscopy

Biomed. Opt. Express 12(1), 41-54 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Hyperspectral microscopy combined with DAPI staining for the identification of hepatic carcinoma cells

Biomed. Opt. Express 12(1), 173-180 (2021)  View: HTML | PDF

Artefact removal in ground truth deficient fluctuations-based nanoscopy images using deep learning

Biomed. Opt. Express 12(1), 191-210 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Comparative study of the influence of imaging resolution on linear retardance parameters derived from the Mueller matrix

Biomed. Opt. Express 12(1), 211-225 (2021)  View: HTML | PDF

Dynamic real-time subtraction of stray-light and background for multiphoton imaging

Biomed. Opt. Express 12(1), 288-302 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Label-free imaging of fibroblast membrane interfaces and protein signatures with vibrational infrared photothermal and phase signals

Biomed. Opt. Express 12(1), 303-319 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Adaptive optics enables aberration-free single-objective remote focusing for two-photon fluorescence microscopy

Biomed. Opt. Express 12(1), 354-366 (2021)  View: HTML | PDF

Label-free and noninvasive method for assessing the metabolic status in type 2 diabetic rats with myocardium diastolic dysfunction

Biomed. Opt. Express 12(1), 480-493 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Characterization of fibrillar collagen isoforms in infarcted mouse hearts using second harmonic generation imaging

Biomed. Opt. Express 12(1), 604-618 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Molecular Imaging and Nanoparticles

Hyperspectral imaging and spectral unmixing for improving whole-body fluorescence cryo-imaging

Biomed. Opt. Express 12(1), 395-408 (2021)  View: HTML | PDF

Uptake quantification of gold nanoparticles inside of cancer cells using high order image correlation spectroscopy

Biomed. Opt. Express 12(1), 539-552 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Multimodal Imaging

Deep-learning based multi-modal retinal image registration for the longitudinal analysis of patients with age-related macular degeneration

Biomed. Opt. Express 12(1), 619-636 (2021)  View: HTML | PDF

Optical Biophysics and Photobiology

Detection of singlet oxygen luminescence for experimental corneal rose bengal photodynamic antimicrobial therapy

Biomed. Opt. Express 12(1), 272-287 (2021)  View: HTML | PDF

Laser-induced corneal injury: validation of a computer model to predict thresholds

Biomed. Opt. Express 12(1), 336-353 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Optical Biosensors

Positive role of the long luminescence lifetime of upconversion nanophosphors on resonant surfaces for ultra-compact filter-free bio-assays

Biomed. Opt. Express 12(1), 1-19 (2021)  View: HTML | PDF

Systematic analysis of video-based pulse measurement from compressed videos

Biomed. Opt. Express 12(1), 494-508 (2021)  View: HTML | PDF

Optical Coherence Tomography

Maximum a posteriori signal recovery for optical coherence tomography angiography image generation and denoising

Biomed. Opt. Express 12(1), 55-68 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

OCT-OCTA segmentation: combining structural and blood flow information to segment Bruch’s membrane

Biomed. Opt. Express 12(1), 84-99 (2021)  View: HTML | PDF

Editors' Pick

Multi-beam OCT imaging based on an integrated, free-space interferometer

Biomed. Opt. Express 12(1), 100-109 (2021)  View: HTML | PDF

Intrinsic spectrally-dependent background in spectroscopic visible-light optical coherence tomography

Biomed. Opt. Express 12(1), 110-124 (2021)  View: HTML | PDF

Editors' Pick

Efficient and high accuracy 3-D OCT angiography motion correction in pathology

Biomed. Opt. Express 12(1), 125-146 (2021)  View: HTML | PDF

Correction of circumferential and longitudinal motion distortion in high-speed catheter/endoscope-based optical coherence tomography

Biomed. Opt. Express 12(1), 226-246 (2021)  View: HTML | PDF

Vascular morphology and blood flow signatures for differential artery-vein analysis in optical coherence tomography of the retina

Biomed. Opt. Express 12(1), 367-379 (2021)  View: HTML | PDF  [Suppl. Mat. (3)]

Optimizing 3D retinal vasculature imaging in diabetic retinopathy using registration and averaging of OCT-A

Biomed. Opt. Express 12(1), 553-570 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Quantitative measurement of mechanical properties in wound healing processes in a corneal stroma model by using vibrational optical coherence elastography (OCE)

Biomed. Opt. Express 12(1), 588-603 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Accurately motion-corrected Lissajous OCT with multi-type image registration

Biomed. Opt. Express 12(1), 637-653 (2021)  View: HTML | PDF

Optics in Biotechnology

On-chip absorption spectroscopy enabled by graded index fiber tips

Biomed. Opt. Express 12(1), 181-190 (2021)  View: HTML | PDF

Photoacoustic Imaging and Spectroscopy

Histopathology for Mohs micrographic surgery with photoacoustic remote sensing microscopy

Biomed. Opt. Express 12(1), 654-665 (2021)  View: HTML | PDF

Single-wavelength water muted photoacoustic system for detecting physiological concentrations of endogenous molecules

Biomed. Opt. Express 12(1), 666-675 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Terahertz Spectroscopy and Imaging

Terahertz dielectric spectroscopy of human brain gliomas and intact tissues ex vivo: double-Debye and double-overdamped-oscillator models of dielectric response

Biomed. Opt. Express 12(1), 69-83 (2021)  View: HTML | PDF

Tissue Optics and Spectroscopy

Light transport modeling in highly complex tissues using the implicit mesh-based Monte Carlo algorithm

Biomed. Opt. Express 12(1), 147-161 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Direct measurement of the scattering coefficient

Biomed. Opt. Express 12(1), 320-335 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

Direct mapping from diffuse reflectance to chromophore concentrations in multi-fx spatial frequency domain imaging (SFDI) with a deep residual network (DRN)

Biomed. Opt. Express 12(1), 433-443 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Effect of adipose tissue thickness and tissue optical properties on the differential pathlength factor estimation for NIRS studies on human skeletal muscle

Biomed. Opt. Express 12(1), 571-587 (2021)  View: HTML | PDF

Dual-DMD hyperspectral spatial frequency domain imaging (SFDI) using dispersed broadband illumination with a demonstration of blood stain spectral monitoring

Biomed. Opt. Express 12(1), 676-688 (2021)  View: HTML | PDF  [Suppl. Mat. (2)]

Vision and Visual Optics

Multi-layer Shack-Hartmann wavefront sensing in the point source regime

Biomed. Opt. Express 12(1), 409-432 (2021)  View: HTML | PDF

Two-photon microperimetry with picosecond pulses

Biomed. Opt. Express 12(1), 462-479 (2021)  View: HTML | PDF  [Suppl. Mat. (1)]

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