Abstract

This feature issue of Biomedical Optics Express represents a cross-section of the most recent work in tissue optics, including exciting developments in tissue optical clearing, deep tissue imaging, optical elastography, nanophotonics in tissue, and therapeutic applications of light, amongst others. A collection of 33 papers provides a comprehensive overview of current research in tissue optics, much of it inspired and informed by the pioneering work of Prof. Valery Tuchin. The issue contains three invited manuscripts and several mini-reviews that we hope will benefit researchers in this exciting area.

© 2019 Optical Society of America under the terms of the OSA Open Access Publishing Agreement

Full Article  |  PDF Article
OSA Recommended Articles
Nonlinear fiber optics: its history and recent progress [Invited]

Govind P. Agrawal
J. Opt. Soc. Am. B 28(12) A1-A10 (2011)

Manipulating Light Waves: introduction

Randy A. Bartels, Brian G. Hoover, Zeev Zalevsky, and H. John Caulfield
Appl. Opt. 47(4) MLW1-MLW3 (2008)

Quantitative optical coherence elastography based on fiber-optic probe for in situ measurement of tissue mechanical properties

Yi Qiu, Yahui Wang, Yiqing Xu, Namas Chandra, James Haorah, Basil Hubbi, Bryan J. Pfister, and Xuan Liu
Biomed. Opt. Express 7(2) 688-700 (2016)

References

  • View by:
  • |
  • |
  • |

  1. V. V. Tuchin, Tissue Optics: Light Scattering Methods and Instruments for Medical Diagnosis (SPIE, Bellingham, WA, 2007).
  2. I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.
  3. T. Zheng, Z. Feng, X. Wang, T. Jiang, R. Jin, P. Zhao, T. Luo, H. Gong, Q. Luo, and J. Yuan, “Review of micro-optical sectioning tomography (MOST): technology and applications for whole-brain optical imaging [Invited],” Biomed. Opt. Express 10(8), 4075–4096 (2019).
    [Crossref] [PubMed]
  4. P. Rakotomanga, C. Soussen, G. Khairallah, M. Amouroux, S. Zaytsev, E. Genina, H. Chen, A. Delconte, C. Daul, V. Tuchin, and W. Blondel, “Source separation approach for the analysis of spatially resolved multiply excited autofluorescence spectra during optical clearing of ex vivo skin,” Biomed. Opt. Express 10(7), 3410–3424 (2019).
    [Crossref] [PubMed]
  5. Q. Xie, N. Zeng, Y. Huang, V. V. Tuchin, and H. Ma, “Study on the tissue clearing process using different agents by Mueller matrix microscope,” Biomed. Opt. Express 10(7), 3269–3280 (2019).
    [Crossref] [PubMed]
  6. E. V. Gubarkova, A. A. Sovetsky, V. Y. Zaitsev, A. L. Matveyev, D. A. Vorontsov, M. A. Sirotkina, L. A. Matveev, A. A. Plekhanov, N. P. Pavlova, S. S. Kuznetsov, A. Y. Vorontsov, E. V. Zagaynova, and N. D. Gladkova, “OCT-elastography-based optical biopsy for breast cancer delineation and express assessment of morphological/molecular subtypes,” Biomed. Opt. Express 10(5), 2244–2263 (2019).
    [Crossref] [PubMed]
  7. F. Zvietcovich, G. R. Ge, H. Mestre, M. Giannetto, M. Nedergaard, J. P. Rolland, and K. J. Parker, “Longitudinal shear waves for elastic characterization of tissues in optical coherence elastography,” Biomed. Opt. Express 10(7), 3699–3718 (2019).
    [Crossref] [PubMed]
  8. M. Ravanfar and G. Yao, “Simultaneous tractography and elastography imaging of the zone-specific structural and mechanical responses in articular cartilage under compressive loading,” Biomed. Opt. Express 10(7), 3241–3256 (2019).
    [Crossref] [PubMed]
  9. A. L. Lopez and I. V. Larina, “Second harmonic generation microscopy of early embryonic mouse hearts,” Biomed. Opt. Express 10(6), 2898–2908 (2019).
    [Crossref] [PubMed]
  10. I. V. Ilina, Y. V. Khramova, M. A. Filatov, and D. S. Sitnikov, “Application of femtosecond laser microsurgery in assisted reproductive technologies for preimplantation embryo tagging,” Biomed. Opt. Express 10(6), 2985–2995 (2019).
    [Crossref] [PubMed]
  11. Y. Zabari, S. Asraf, N. Ozana, N. Shabairou, and Z. Zalevsky, “Optical tissue probing: human skin hydration detection by speckle patterns analysis,” Biomed. Opt. Express 10(9), 4874–4883 (2019).
    [Crossref]
  12. A. E. Lugovtsov, Y. I. Gurfinkel, P. B. Ermolinskiy, A. I. Maslyanitsina, L. I. Dyachuk, and A. V. Priezzhev, “Optical assessment of alterations of microrheologic and microcirculation parameters in cardiovascular diseases,” Biomed. Opt. Express 10(8), 3974–3986 (2019).
    [Crossref] [PubMed]
  13. W. Li, B. F. Narice, D. O. Anumba, and S. J. Matcher, “Polarization-sensitive optical coherence tomography with a conical beam scan for the investigation of birefringence and collagen alignment in the human cervix,” Biomed. Opt. Express 10(8), 4190–4206 (2019).
    [Crossref] [PubMed]
  14. V. Demidov, L. A. Matveev, O. Demidova, A. L. Matveyev, V. Y. Zaitsev, C. Flueraru, and I. A. Vitkin, “Analysis of low-scattering regions in optical coherence tomography: applications to neurography and lymphangiography,” Biomed. Opt. Express 10(8), 4207–4219 (2019).
    [Crossref] [PubMed]
  15. M. D. Mokrousov, M. V. Novoselova, J. Nolan, W. Harrington, P. Rudakovskaya, D. N. Bratashov, E. I. Galanzha, J. P. Fuenzalida-Werner, B. P. Yakimov, G. Nazarikov, V. P. Drachev, E. A. Shirshin, V. Ntziachristos, A. C. Stiel, V. P. Zharov, and D. A. Gorin, “Amplification of photoacoustic effect in bimodal polymer particles by self-quenching of indocyanine green,” Biomed. Opt. Express 10(9), 4775–4789 (2019).
    [Crossref]
  16. Z. Chen, X. L. Deán-Ben, N. Liu, V. Gujrati, S. Gottschalk, V. Ntziachristos, and D. Razansky, “Concurrent fluorescence and volumetric optoacoustic tomography of nanoagent perfusion and bio-distribution in solid tumors,” Biomed. Opt. Express 10(10), 5093–5102 (2019).
    [Crossref]
  17. L. A. Dykman and N. G. Khlebtsov, “Gold nanoparticles in chemo-, immuno-, and combined therapy: review [Invited],” Biomed. Opt. Express 10(7), 3152–3182 (2019).
    [Crossref] [PubMed]
  18. K. A. Hallam and S. Y. Emelianov, “Toward optimization of blood brain barrier opening induced by laser-activated perfluorocarbon nanodroplets,” Biomed. Opt. Express 10(7), 3139–3151 (2019).
    [Crossref] [PubMed]
  19. H. Schneckenburger, “Laser-assisted optoporation of cells and tissues - a mini-review,” Biomed. Opt. Express 10(6), 2883–2888 (2019).
    [Crossref] [PubMed]

2019 (17)

E. V. Gubarkova, A. A. Sovetsky, V. Y. Zaitsev, A. L. Matveyev, D. A. Vorontsov, M. A. Sirotkina, L. A. Matveev, A. A. Plekhanov, N. P. Pavlova, S. S. Kuznetsov, A. Y. Vorontsov, E. V. Zagaynova, and N. D. Gladkova, “OCT-elastography-based optical biopsy for breast cancer delineation and express assessment of morphological/molecular subtypes,” Biomed. Opt. Express 10(5), 2244–2263 (2019).
[Crossref] [PubMed]

H. Schneckenburger, “Laser-assisted optoporation of cells and tissues - a mini-review,” Biomed. Opt. Express 10(6), 2883–2888 (2019).
[Crossref] [PubMed]

A. L. Lopez and I. V. Larina, “Second harmonic generation microscopy of early embryonic mouse hearts,” Biomed. Opt. Express 10(6), 2898–2908 (2019).
[Crossref] [PubMed]

I. V. Ilina, Y. V. Khramova, M. A. Filatov, and D. S. Sitnikov, “Application of femtosecond laser microsurgery in assisted reproductive technologies for preimplantation embryo tagging,” Biomed. Opt. Express 10(6), 2985–2995 (2019).
[Crossref] [PubMed]

K. A. Hallam and S. Y. Emelianov, “Toward optimization of blood brain barrier opening induced by laser-activated perfluorocarbon nanodroplets,” Biomed. Opt. Express 10(7), 3139–3151 (2019).
[Crossref] [PubMed]

L. A. Dykman and N. G. Khlebtsov, “Gold nanoparticles in chemo-, immuno-, and combined therapy: review [Invited],” Biomed. Opt. Express 10(7), 3152–3182 (2019).
[Crossref] [PubMed]

M. Ravanfar and G. Yao, “Simultaneous tractography and elastography imaging of the zone-specific structural and mechanical responses in articular cartilage under compressive loading,” Biomed. Opt. Express 10(7), 3241–3256 (2019).
[Crossref] [PubMed]

Q. Xie, N. Zeng, Y. Huang, V. V. Tuchin, and H. Ma, “Study on the tissue clearing process using different agents by Mueller matrix microscope,” Biomed. Opt. Express 10(7), 3269–3280 (2019).
[Crossref] [PubMed]

P. Rakotomanga, C. Soussen, G. Khairallah, M. Amouroux, S. Zaytsev, E. Genina, H. Chen, A. Delconte, C. Daul, V. Tuchin, and W. Blondel, “Source separation approach for the analysis of spatially resolved multiply excited autofluorescence spectra during optical clearing of ex vivo skin,” Biomed. Opt. Express 10(7), 3410–3424 (2019).
[Crossref] [PubMed]

F. Zvietcovich, G. R. Ge, H. Mestre, M. Giannetto, M. Nedergaard, J. P. Rolland, and K. J. Parker, “Longitudinal shear waves for elastic characterization of tissues in optical coherence elastography,” Biomed. Opt. Express 10(7), 3699–3718 (2019).
[Crossref] [PubMed]

A. E. Lugovtsov, Y. I. Gurfinkel, P. B. Ermolinskiy, A. I. Maslyanitsina, L. I. Dyachuk, and A. V. Priezzhev, “Optical assessment of alterations of microrheologic and microcirculation parameters in cardiovascular diseases,” Biomed. Opt. Express 10(8), 3974–3986 (2019).
[Crossref] [PubMed]

T. Zheng, Z. Feng, X. Wang, T. Jiang, R. Jin, P. Zhao, T. Luo, H. Gong, Q. Luo, and J. Yuan, “Review of micro-optical sectioning tomography (MOST): technology and applications for whole-brain optical imaging [Invited],” Biomed. Opt. Express 10(8), 4075–4096 (2019).
[Crossref] [PubMed]

W. Li, B. F. Narice, D. O. Anumba, and S. J. Matcher, “Polarization-sensitive optical coherence tomography with a conical beam scan for the investigation of birefringence and collagen alignment in the human cervix,” Biomed. Opt. Express 10(8), 4190–4206 (2019).
[Crossref] [PubMed]

V. Demidov, L. A. Matveev, O. Demidova, A. L. Matveyev, V. Y. Zaitsev, C. Flueraru, and I. A. Vitkin, “Analysis of low-scattering regions in optical coherence tomography: applications to neurography and lymphangiography,” Biomed. Opt. Express 10(8), 4207–4219 (2019).
[Crossref] [PubMed]

M. D. Mokrousov, M. V. Novoselova, J. Nolan, W. Harrington, P. Rudakovskaya, D. N. Bratashov, E. I. Galanzha, J. P. Fuenzalida-Werner, B. P. Yakimov, G. Nazarikov, V. P. Drachev, E. A. Shirshin, V. Ntziachristos, A. C. Stiel, V. P. Zharov, and D. A. Gorin, “Amplification of photoacoustic effect in bimodal polymer particles by self-quenching of indocyanine green,” Biomed. Opt. Express 10(9), 4775–4789 (2019).
[Crossref]

Y. Zabari, S. Asraf, N. Ozana, N. Shabairou, and Z. Zalevsky, “Optical tissue probing: human skin hydration detection by speckle patterns analysis,” Biomed. Opt. Express 10(9), 4874–4883 (2019).
[Crossref]

Z. Chen, X. L. Deán-Ben, N. Liu, V. Gujrati, S. Gottschalk, V. Ntziachristos, and D. Razansky, “Concurrent fluorescence and volumetric optoacoustic tomography of nanoagent perfusion and bio-distribution in solid tumors,” Biomed. Opt. Express 10(10), 5093–5102 (2019).
[Crossref]

Amouroux, M.

Anumba, D. O.

Asraf, S.

Blondel, W.

Bratashov, D. N.

Chen, H.

Chen, Z.

Cicchi, R.

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Costantini, I.

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Daul, C.

Deán-Ben, X. L.

Delconte, A.

Demidov, V.

Demidova, O.

Drachev, V. P.

Dyachuk, L. I.

Dykman, L. A.

Emelianov, S. Y.

Ermolinskiy, P. B.

Feng, Z.

Filatov, M. A.

Flueraru, C.

Fuenzalida-Werner, J. P.

Galanzha, E. I.

Ge, G. R.

Genina, E.

Giannetto, M.

Gladkova, N. D.

Gong, H.

Gorin, D. A.

Gottschalk, S.

Gubarkova, E. V.

Gujrati, V.

Gurfinkel, Y. I.

Hallam, K. A.

Harrington, W.

Huang, Y.

Ilina, I. V.

Jiang, T.

Jin, R.

Khairallah, G.

Khlebtsov, N. G.

Khramova, Y. V.

Kuznetsov, S. S.

Larina, I. V.

Li, W.

Liu, N.

Lopez, A. L.

Lugovtsov, A. E.

Luo, Q.

Luo, T.

Ma, H.

Maslyanitsina, A. I.

Matcher, S. J.

Matveev, L. A.

Matveyev, A. L.

Mestre, H.

Mokrousov, M. D.

Narice, B. F.

Nazarikov, G.

Nedergaard, M.

Nolan, J.

Novoselova, M. V.

Ntziachristos, V.

Ozana, N.

Parker, K. J.

Pavlova, N. P.

Plekhanov, A. A.

Priezzhev, A. V.

Rakotomanga, P.

Ravanfar, M.

Razansky, D.

Rolland, J. P.

Rudakovskaya, P.

Saverio Pavone, F.

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Schneckenburger, H.

Shabairou, N.

Shirshin, E. A.

Silvestri, L.

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Sirotkina, M. A.

Sitnikov, D. S.

Soussen, C.

Sovetsky, A. A.

Stiel, A. C.

Tuchin, V.

Tuchin, V. V.

Vanzi, F.

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Vitkin, I. A.

Vorontsov, A. Y.

Vorontsov, D. A.

Wang, X.

Xie, Q.

Yakimov, B. P.

Yao, G.

Yuan, J.

Zabari, Y.

Zagaynova, E. V.

Zaitsev, V. Y.

Zalevsky, Z.

Zaytsev, S.

Zeng, N.

Zhao, P.

Zharov, V. P.

Zheng, T.

Zvietcovich, F.

Biomed. Opt. Express (17)

T. Zheng, Z. Feng, X. Wang, T. Jiang, R. Jin, P. Zhao, T. Luo, H. Gong, Q. Luo, and J. Yuan, “Review of micro-optical sectioning tomography (MOST): technology and applications for whole-brain optical imaging [Invited],” Biomed. Opt. Express 10(8), 4075–4096 (2019).
[Crossref] [PubMed]

P. Rakotomanga, C. Soussen, G. Khairallah, M. Amouroux, S. Zaytsev, E. Genina, H. Chen, A. Delconte, C. Daul, V. Tuchin, and W. Blondel, “Source separation approach for the analysis of spatially resolved multiply excited autofluorescence spectra during optical clearing of ex vivo skin,” Biomed. Opt. Express 10(7), 3410–3424 (2019).
[Crossref] [PubMed]

Q. Xie, N. Zeng, Y. Huang, V. V. Tuchin, and H. Ma, “Study on the tissue clearing process using different agents by Mueller matrix microscope,” Biomed. Opt. Express 10(7), 3269–3280 (2019).
[Crossref] [PubMed]

E. V. Gubarkova, A. A. Sovetsky, V. Y. Zaitsev, A. L. Matveyev, D. A. Vorontsov, M. A. Sirotkina, L. A. Matveev, A. A. Plekhanov, N. P. Pavlova, S. S. Kuznetsov, A. Y. Vorontsov, E. V. Zagaynova, and N. D. Gladkova, “OCT-elastography-based optical biopsy for breast cancer delineation and express assessment of morphological/molecular subtypes,” Biomed. Opt. Express 10(5), 2244–2263 (2019).
[Crossref] [PubMed]

F. Zvietcovich, G. R. Ge, H. Mestre, M. Giannetto, M. Nedergaard, J. P. Rolland, and K. J. Parker, “Longitudinal shear waves for elastic characterization of tissues in optical coherence elastography,” Biomed. Opt. Express 10(7), 3699–3718 (2019).
[Crossref] [PubMed]

M. Ravanfar and G. Yao, “Simultaneous tractography and elastography imaging of the zone-specific structural and mechanical responses in articular cartilage under compressive loading,” Biomed. Opt. Express 10(7), 3241–3256 (2019).
[Crossref] [PubMed]

A. L. Lopez and I. V. Larina, “Second harmonic generation microscopy of early embryonic mouse hearts,” Biomed. Opt. Express 10(6), 2898–2908 (2019).
[Crossref] [PubMed]

I. V. Ilina, Y. V. Khramova, M. A. Filatov, and D. S. Sitnikov, “Application of femtosecond laser microsurgery in assisted reproductive technologies for preimplantation embryo tagging,” Biomed. Opt. Express 10(6), 2985–2995 (2019).
[Crossref] [PubMed]

Y. Zabari, S. Asraf, N. Ozana, N. Shabairou, and Z. Zalevsky, “Optical tissue probing: human skin hydration detection by speckle patterns analysis,” Biomed. Opt. Express 10(9), 4874–4883 (2019).
[Crossref]

A. E. Lugovtsov, Y. I. Gurfinkel, P. B. Ermolinskiy, A. I. Maslyanitsina, L. I. Dyachuk, and A. V. Priezzhev, “Optical assessment of alterations of microrheologic and microcirculation parameters in cardiovascular diseases,” Biomed. Opt. Express 10(8), 3974–3986 (2019).
[Crossref] [PubMed]

W. Li, B. F. Narice, D. O. Anumba, and S. J. Matcher, “Polarization-sensitive optical coherence tomography with a conical beam scan for the investigation of birefringence and collagen alignment in the human cervix,” Biomed. Opt. Express 10(8), 4190–4206 (2019).
[Crossref] [PubMed]

V. Demidov, L. A. Matveev, O. Demidova, A. L. Matveyev, V. Y. Zaitsev, C. Flueraru, and I. A. Vitkin, “Analysis of low-scattering regions in optical coherence tomography: applications to neurography and lymphangiography,” Biomed. Opt. Express 10(8), 4207–4219 (2019).
[Crossref] [PubMed]

M. D. Mokrousov, M. V. Novoselova, J. Nolan, W. Harrington, P. Rudakovskaya, D. N. Bratashov, E. I. Galanzha, J. P. Fuenzalida-Werner, B. P. Yakimov, G. Nazarikov, V. P. Drachev, E. A. Shirshin, V. Ntziachristos, A. C. Stiel, V. P. Zharov, and D. A. Gorin, “Amplification of photoacoustic effect in bimodal polymer particles by self-quenching of indocyanine green,” Biomed. Opt. Express 10(9), 4775–4789 (2019).
[Crossref]

Z. Chen, X. L. Deán-Ben, N. Liu, V. Gujrati, S. Gottschalk, V. Ntziachristos, and D. Razansky, “Concurrent fluorescence and volumetric optoacoustic tomography of nanoagent perfusion and bio-distribution in solid tumors,” Biomed. Opt. Express 10(10), 5093–5102 (2019).
[Crossref]

L. A. Dykman and N. G. Khlebtsov, “Gold nanoparticles in chemo-, immuno-, and combined therapy: review [Invited],” Biomed. Opt. Express 10(7), 3152–3182 (2019).
[Crossref] [PubMed]

K. A. Hallam and S. Y. Emelianov, “Toward optimization of blood brain barrier opening induced by laser-activated perfluorocarbon nanodroplets,” Biomed. Opt. Express 10(7), 3139–3151 (2019).
[Crossref] [PubMed]

H. Schneckenburger, “Laser-assisted optoporation of cells and tissues - a mini-review,” Biomed. Opt. Express 10(6), 2883–2888 (2019).
[Crossref] [PubMed]

Other (2)

V. V. Tuchin, Tissue Optics: Light Scattering Methods and Instruments for Medical Diagnosis (SPIE, Bellingham, WA, 2007).

I. Costantini, R. Cicchi, L. Silvestri, F. Vanzi, and F. Saverio Pavone, “In-vivo and ex-vivo optical clearing methods for biological tissues: review,” Biomed. Opt. Express. in press.

Cited By

OSA participates in Crossref's Cited-By Linking service. Citing articles from OSA journals and other participating publishers are listed here.

Alert me when this article is cited.


Metrics